Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq217 526 2e-144 >seq217 Length=20966 Score = 526 bits (582), Expect = 2e-144 Identities = 1098/1612 (68%), Gaps = 39/1612 (2%) Strand=Plus/Plus Query 148172 CTGCACCGAGCCGCGGT-GCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230 |||||| |||||| ||| | ||| | |||| || |||| ||| ||| | | | || Sbjct 16924 CTGCACTGAGCCGTGGTCGTGCAGGA-TCTGGTTACGCACCTCGGGCGTCCAGATGCCGA 16982 Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 ||||||| || || | ||||| |||| ||||| | | |||||||| || ||||||| Sbjct 16983 GCTCGATGAGCTCCTTCATCAGGTACTTGTTCACGATCGTGAACTCGCCTGCAAGCACGC 17042 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 | || |||| |||| |||| ||||| || | ||||||||||||||| | ||||||| Sbjct 17043 GGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCG 17102 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTA 148410 |||||| ||||| ||||| ||| | ||||||||||||||||| ||| | | Sbjct 17103 CGGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGA 17162 Query 148411 TTTTGCGCTTCAGAGCCGCCCAGTCCCAGAG--CGG-CGACGGTGTCACGTTCCACATGT 148467 || ||| || || |||||||||||||| ||| || ||| || ||| |||||||| Sbjct 17163 CGCTGGCCTTGAGCGCGGCCCAGTCCCAGAGGCCGGACGTCGGCGTGACGCCCCACATGT 17222 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 ||||||| | ||||| ||| |||| ||||||||| | |||||| |||||| Sbjct 17223 CGTACTGGAAGATGCCCTTGCTCACGGGTGAGCCCTCGTAGCTGGCGTACGGGCCGTGCT 17282 Query 148528 CCGCCGCCAGTTCGCAGCTCG-CCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || ||| || || || | | |||| | ||||||| |||| | ||||||| || | | Sbjct 17283 CCTTCGCGAGCTC-CATCGAGGCCTCCATCGCGCCGAAGTACAGCGTCTCGAAGATGTTC 17341 Query 148587 CTGTTGAGCAGCGCC-GCCGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGT 148644 |||||||| ||| ||| ||||| || ||| | || | || | | ||||||| Sbjct 17342 TTGTTGAGCT-CGCGTGCCTCGTCGCTCTCAAACG-CGTAGCCCATGAGGATGAACGCGT 17399 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | || || ||||| ||||| | ||| || || ||||| | |||| ||| || Sbjct 17400 CCGCGAGACCCTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTT---CGCTCGG 17456 Query 148705 TCTCGAG---CGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761 |||| | ||| |||| |||| |||||||| ||||| || |||||| || |||| Sbjct 17457 CCTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCGCGTGACGACCT 17516 Query 148762 TTGTAATTCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCA 148818 | || || | |||| | || ||| | |||||| || | | | || Sbjct 17517 TGGTGATGTCGTACAGCTTCTTGAAGTCGAAGGTCTTGTCGTCGTTCACAAACTTGGACA 17576 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 ||||| || || || |||||||| || ||| || || | ||||||| | | || Sbjct 17577 GCGCGATGGACGCGAGGTTGCACACCGCGACCTCGTCGGGCGACGTGTACTCGAGCACCT 17636 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 || ||| || ||||| | |||| ||| | ||||| || || ||||| ||| | Sbjct 17637 CGCAGCAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTAC 17696 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995 ||| ||||||||||||||||||||| ||| || || | ||||| || | || || Sbjct 17697 ACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGA 17756 Query 148996 ACCGATGCAGGTCCTGCGCGCGCA-CTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054 ||| || | ||||||||| | | | ||| || ||| ||||| ||||||| Sbjct 17757 ACCAGAGCTG---CTGCGCGCGGATCGTCTTGCGCGC-GCGGCCCTCGCGCTCGTACTGG 17812 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 |||||| ||||||| | || || | || |||||| || || || |||| Sbjct 17813 TGGTACAGCGCCTCGAACTCGTCACCCCACGTCGTGTAGAGACCCGGTGCCTCGTTCGGG 17872 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 || | || |||| |||||| || | ||||||||||| || |||||||| | ||| Sbjct 17873 CAGAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCAC 17932 Query 149175 AGCGCGTACATGAGGTCGCG--CGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 | |||||| | || || || ||| ||||| ||| ||| ||| |||| Sbjct 17933 ATCGCGTAGAACAGATCACGAGCGCGGTGCAGC--TCGTTGCCGTGGTTCTTCTTGAGGT 17990 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 ||| | ||| ||||| |||||||||||||| | |||| ||||| || |||||||| Sbjct 17991 CGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGC 18050 Query 149293 GCTTGCCGCC---CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349 |||||||||| ||| || || | ||| || ||| ||| ||||| || | ||| || Sbjct 18051 GCTTGCCGCCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCA 18110 Query 149350 CAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTT 149407 | | ||| | | | |||||| || | ||| ||| | ||||| | | || Sbjct 18111 CGAGGCCGTTCGACGAGCCGTTCGTGCCACGGATGTACGAGTTGGTCGCGC--GGATGTT 18168 Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGT 149467 ||||||| |||| || ||||||||| | |||| |||||| ||||| | |||||| Sbjct 18169 GTGCACGCTGACACCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGT 18228 Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTG 149527 |||||||||||||| |||| |||||||| ||||| |||||||| ||| || Sbjct 18229 GTCATAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTG 18288 Query 149528 CGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCT 149587 ||| |||||||||| ||||| || || | ||||| || || | | || Sbjct 18289 CGGGCGCGGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGA 18348 Query 149588 CATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGAC 149647 ||| |||||||| ||||||| || ||| ||||||| |||||||| | ||||| Sbjct 18349 CATGTACTCGTACGTCTCGAGCGCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGAC 18408 Query 149648 GCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCC 149707 ||||| | ||| |||||||| ||||| || || ||| || | || | ||| Sbjct 18409 GCGCAGAATCATCTGCTGCGGGCGCTCAGCGACCTTGCCACCGACGCGCAGGAGGTACGA 18468 Query 149708 GTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGG 149759 || || || |||||| |||||||||| | ||| |||||||||||| ||||| Sbjct 18469 CTTCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTGG 18520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483353822048160