Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq217 239 4e-58 >seq217 Length=20966 Score = 239 bits (264), Expect = 4e-58 Identities = 986/1519 (65%), Gaps = 51/1519 (3%) Strand=Plus/Plus Query 146905 AACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCA 146964 |||||||| || ||||| || | | |||| ||| | ||||| ||||| | ||||| Sbjct 17024 AACTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCG 17083 Query 146965 TTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTT 147024 || ||||| | || || || || | || || ||||| ||| | || || || || Sbjct 17084 TTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTG 17143 Query 147025 CGCAGACCGTAC-GCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACATC---GACGA 147080 |||| |||||| || || | | || |||| | | ||||||||| | |||| Sbjct 17144 CGCACGCCGTACTGCGCG-ACGCTGGCCTTGAGCGCGGCCCAGTCCCAGAGGCCGGACGT 17202 Query 147081 GGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAA 147140 ||||| ||| ||||||||||||||||| | || || |||| ||| || | Sbjct 17203 CGGCGTGACGCCCCACATGTCGTACTGGAAGATGCCCTTGCTCACGGGTGAGCCCTCGTA 17262 Query 147141 CGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTG-CCTCGAGCGCTCCATAGT 147199 | | ||| |||| || ||| | || || | | |||| | ||| || ||| Sbjct 17263 GCTGGCGTACGGGCCGTGCTCCTTCGCGAGCTC-CATCGAGGCCTCCATCGCGCCGAAGT 17321 Query 147200 ATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATA- 147258 | | || ||| ||| | ||||| || || || || |||||||| || || || Sbjct 17322 ACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGTGCCTCGTCGCTCTCA-AACGCGTAG 17380 Query 147259 CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTT 147318 | || || | || || || || | |||||| | |||| |||||| || || || Sbjct 17381 CCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGGCGGTGGCGC 17440 Query 147319 TCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATCTTGTTGAG 147377 |||||| |||| || |||| || || |||| |||| || || | ||||||||| Sbjct 17441 AGGTTGCTTCGCTCGGC-CTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTGAG 17499 Query 147378 GTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTC 147437 ||| ||| || || || || || | || |||| ||| || | ||| ||| || Sbjct 17500 GTTGCGCGTGACGACCTTGGTGATGTCGTACAGCTTCTTGAAGTCGAAGGTCTTGTCGTC 17559 Query 147438 GA-CACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG 147496 | ||| || |||| || ||||| ||||| || ||||| || || ||| |||| Sbjct 17560 GTTCACAAAC---TTGGA-CAGCGCGATGGACGCGAGGTTGCACACCGCGACCTCGTCGG 17615 Query 147497 -CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTT 147555 || || |||||| | | ||| ||| |||||||| | || || | || Sbjct 17616 GCGACG-TGTACTCGAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTC 17674 Query 147556 TGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615 ||||| || || || || |||| ||| ||| | ||||||||||| ||| |||||| Sbjct 17675 TGCTGGTTCGACTTGCGGTTACACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCG 17734 Query 147616 ACTTGCGTTTCAACGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAG 147672 | |||| || | ||| |||| || | |||||| || | | || || | Sbjct 17735 ATCTGCGACTCGAGGATCGCGAACCAGAGCTG---CTGCGCGCGGATCGTCTTGCGCGCG 17791 Query 147673 CGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCG-GC 147731 ||||||||| |||||| | | ||||| | ||| |||||||| || | ||| | Sbjct 17792 CGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGTCACCCCACG--TCGTGT 17849 Query 147732 A-AGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTC 147790 | || || || || | ||| || | ||| |||| | ||| || | |||||| Sbjct 17850 AGAGACCCGGTGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCT 17909 Query 147791 GCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCG--CGCTTTGCAATCCTC 147848 ||| || ||||| || | ||||| |||||| | ||||| || ||| |||| ||| Sbjct 17910 TCATGAAGAGATCGGGAATCCACATCGCGTAGAACAGATCACGAGCGCGGTGCAG--CTC 17967 Query 147849 GGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAA 147907 | ||| ||| || | | || | | | | |||||||||||||||| || || | Sbjct 17968 GTTGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGA-AGATGTCGGCGTGCCACGGCTCGA 18026 Query 147908 TGTAGACGGCCAGCGCACCTTTACGCTTTCCG---CCCTGGTCGACATGGCGCACCATGT 147964 || | || | || || || ||||| ||| ||||| || |||| ||| || ||| Sbjct 18027 GATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGATCCACATAACGCGCCGTGT 18086 Query 147965 TGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCT 148024 ||| |||||||||| |||||| | |||||| ||| | |||||| ||| | ||| | Sbjct 18087 CGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCACGGATGT 18146 Query 148025 TGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATA 148084 | | || || | | ||||||| | || |||||||||||| | |||| || | Sbjct 18147 ACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACACCAATGCCGCCGGCCCACTTGGAGA 18206 Query 148085 TGGCAGCGCAATCGCCCAA---TGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGC 148141 || ||||| | || | |||| |||||||| ||||| ||||| || | | Sbjct 18207 TGCAGGCGCACT-GCTTGAGCGTGTC--ATAGATGCCCTCGATCGAGTCGTCCTTCATGG 18263 Query 148142 CAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGAC 148201 | |||| || ||||| ||| ||||| | |||| || || ||| || || || Sbjct 18264 CGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGGCGTTGAACAGCGTCGGCG 18323 Query 148202 TCGCGTGCGTAAACAATTTTTGACTCAT-CATGCGATACGTCTCAATAGCGTCTTCGATG 148260 |||||||||| || || |||| ||| | || |||||||| | ||| | |||||| Sbjct 18324 TCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCG-TACGTCTCGAGCGCGGCGTCGATG 18382 Query 148261 TCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGC-AAC 148319 || | ||| ||||| | |||||||||| | ||| ||||| || || || || | | Sbjct 18383 TCATGCTTGTGGATGCCGACAGCGACGCGCAGAATCATCTGCTGCGGGCGCTCAGCGACC 18442 Query 148320 TTG--ATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTG 148377 ||| | | | | || || || || ||||| || ||| | |||||||| | | Sbjct 18443 TTGCCACCGACGCGC---AGGAGGTACGACTTCTCGAGCGTCTTGAAGCCAAAGTAGTCG 18499 Query 148378 TAATCAAAATCTAGCTCGT 148396 || ||||| || | |||| Sbjct 18500 TACTCAAAGTCGCGGTCGT 18518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476545165518240