Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq191 230 3e-55 >seq191 Length=22522 Score = 230 bits (254), Expect = 3e-55 Identities = 439/637 (69%), Gaps = 10/637 (2%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | || ||| | | | | ||||||| || || || ||||| Sbjct 15661 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACA 15602 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| | ||||| |||||| || || | ||||| | ||||| || | || || Sbjct 15601 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 15542 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || | | || | || | ||||| |||||| || ||||| || || || || Sbjct 15541 GTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCC 15483 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || |||||||| | || | |||||||| ||| ||||| ||||| |||| ||| ||||| Sbjct 15482 GAGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTA 15423 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 |||||||| | ||||| ||||||||||||||||| | |||||||| |||||||| Sbjct 15422 GAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCA 15363 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | || | | || | |||||| |||| | || | || ||| | Sbjct 15362 TGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCG 15304 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCA 147288 ||||||||| || |||||||| ||| | | | ||| | | |||| |||| ||| Sbjct 15303 CCAGCTGGTCGACTCCCTGGCCAGTGTA-ATCGGCGTGCATGGTCGTGTACTTGGCACCA 15245 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAGA 147346 ||||| | |||||||||||| |||||||| || || ||||| | | | || ||||| Sbjct 15244 AAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGACCGAGA 15185 Query 147347 AGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 || | || || | || ||| || | | ||||| ||| | |||||| Sbjct 15184 --CCGATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGT 15127 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 | | | ||| | || ||| ||| | ||||||||| |||||||| ||| || | Sbjct 15126 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGC 15067 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 | | ||| || || | ||||| |||||||| ||||| Sbjct 15066 CGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 15030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583407157737600