Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq217 132 5e-26 seq3662 86.0 6e-12 >seq217 Length=20966 Score = 132 bits (146), Expect = 5e-26 Identities = 912/1435 (64%), Gaps = 67/1435 (5%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | ||||||| || || ||||| ||| | ||||| |||||||| | Sbjct 18426 CAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCATGACATCGACGCCGCGCTC 18367 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTT----ACGCACGCTTCGCCCACCATGTT 7679 || |||||| | ||||| | || || || |||||||| |||| || |||| Sbjct 18366 GAGACGTACGAGTACATGTC---GCAA-AGCTTCTTCACGCACGCGACGCCGACGCTGTT 18311 Query 7680 TGCCGCGGGCACAAACGCGCCT-CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAG 7738 ||| ||||| |||||| || |||| ||||| || |||| ||||| || | Sbjct 18310 CAACGCCGGCACGC-CGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACG 18252 Query 7739 ACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCG 7798 || ||||| ||||| || ||||||| | |||||| || ||||| | | || Sbjct 18251 ACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCCG 18192 Query 7799 GCGGAATAGGTCTGAACGTAAACGACGTGCGCGC---CAACG-GTAGCCGCATC-GTGTC 7853 |||| || ||| | | ||| || || | ||||| |||| ||| |||| ||| | Sbjct 18191 GCGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACCAACTCGTA----CATCCGTGGC 18136 Query 7854 CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCG 7913 || ||||| | | ||| | | ||||||| ||||||||||||| || ||| ||| Sbjct 18135 -ACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAACGACACGGCGCG 18077 Query 7914 ACATGTAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTG 7970 |||| || ||| || || |||||||| ||| | || || ||| | |||||||| Sbjct 18076 TTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTATCTCGAGCCGTG 18017 Query 7971 GCACGCGGACATTTACGCAGTGCTAAATCT-GCGTCGCAACATGGGTTGCGAAGA-CAGC 8028 |||||| ||||| | || | || | || | | | || | || | || | || Sbjct 18016 GCACGCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACG----GCAACGAGCTGC 17961 Query 8029 AAAGCG--CGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTC 8086 | ||| || ||||| |||| || ||||| | |||||||| || |||| ||||||| Sbjct 17960 ACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAAGCGCGTTG 17901 Query 8087 ATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC---TTTATTAAAAAACG 8143 | | ||| | ||| || | || ||||| || || | | || | ||| Sbjct 17900 AGGCCAACGGCGAGTGGAGCCTGTTCTG-CCCGAACGAGGCACCGGGTCTCTACACGACG 17842 Query 8144 TTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGC 8203 | ||| | || || ||||| | || ||||| | ||| ||| || || || Sbjct 17841 --TGGGGTGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGC-CG--CGCGC 17787 Query 8204 GGCAAGTGAAAGCGCGCG-ACCTGCACCG---CGCCATTATCGAATGTCAAAACGAAACC 8259 ||||| | |||||| | | || | | ||| || |||| | || | ||| || Sbjct 17786 -GCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACG 17728 Query 8260 GGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTG 8319 || | |||||||||||||||||| ||| | || ||| ||| || || ||| | Sbjct 17727 GGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGTCGAACCAGCAGAACCTC 17668 Query 8320 GGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAA 8379 ||||| || | | ||||| || ||| || | | |||||| |||||||||| Sbjct 17667 GGCACGATCCGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGACGAG 17608 Query 8380 GTGGCCGTTTGCAATCTAGCG----TCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTC 8435 || || || ||||| || ||| ||| ||| || ||| | ||| ||||| Sbjct 17607 GTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAA----GTTTG-TGAACGACG--A 17555 Query 8436 AAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACGGTA--CGCAATTTA 8493 || || | |||||| | | || | || | |||| | || | ||||| | Sbjct 17554 CAAGACCTTCGACTTCAAGAAGCTGTACGACATC-ACCAAG-GTCGTCACGCGCAACCTC 17497 Query 8494 GATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAG-CGCGCGTATCGAACATGCG 8552 | |||| || |||| | || || | || | || ||| | | ||| |||| Sbjct 17496 AACAAGGTCATCGACATCAACTACTACCCGATCCCCGAGGCCGAGCGAAGC-AACCTGCG 17438 Query 8553 CCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCT 8612 |||| | || | ||| | |||||||| ||||| || |||||||| | | || || Sbjct 17437 CCACCGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTA 17378 Query 8613 CCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTA 8672 | | | || ||| | || || ||| |||||||| || || || ||| |||| | Sbjct 17377 CGCGTTTGAGAGCGACGAGGCACGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTT 17318 Query 8673 CGGCGCATTAGAAGCC-AGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACG 8731 |||||| | || ||| | || | || || || ||| |||||| |||| Sbjct 17317 CGGCGCGATGGAGGCCTCGATG-GAGCTCGCGAAGGAGCACGGCCCGTACGCCAGCTACG 17259 Query 8732 CGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCT 8791 |||| || | ||| || || || || |||||||||||| |||||||| || | Sbjct 17258 AGGGCTCACCCGTGAGCAAGGGCATCTTCCAGTACGACATGTGGGGCGTCACGCCGACGT 17199 Query 8792 C---TTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATT 8848 | | ||| | ||| || | || || | || || | ||| ||||||| | Sbjct 17198 CCGGCCTCTGGGACTGGGCCGCGCTCAAGGCCAGCGTCGCGCAGTACGGCGTGCGCAACT 17139 Query 8849 CGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAAT 8908 ||||| || | || ||||| || || |||| || || || | || |||||||| | Sbjct 17138 CGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACCGCGCAGATCCTCGGCAACAACGAGT 17079 Query 8909 CCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTT 8963 | | ||||||||||| | |||| ||||| | || ||| | || ||||| || Sbjct 17078 CGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTGCTTGCAGGCGAGTT 17024 >seq3662 Length=2004 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| || ||| | Sbjct 223 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGG 164 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612 ||| |||||||| ||||| || || |||| ||||||||||| || || || ||| Sbjct 163 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCT 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505328377051680