Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq446 179 2e-40 >seq446 Length=14858 Score = 179 bits (198), Expect = 2e-40 Identities = 343/499 (69%), Gaps = 21/499 (4%) Strand=Plus/Minus Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307 ||||||||| |||||| || | ||| | | ||||||||| |||||| || || |||| Sbjct 5725 CATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAACATCGA 5666 Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367 | | ||| | ||||| ||| | ||||||||||| || ||||||| ||| || Sbjct 5665 CGAGCTCTACATCTCGCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCT 5606 Query 66368 CGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCG 66425 || ||| |||| | ||| | |||||||||| ||| || || || || |||||| Sbjct 5605 TGTGCGGTCGGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTCGCTGCGCTTGTGCCG 5548 Query 66426 CGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66485 ||||||||||| |||||||| || || ||| || ||| |||| ||||| |||||| Sbjct 5547 CGCGCCGAGCTGGAAGGCGAGATGGGCGACCAGCAGATCGCGTTGCAGGCGCGGCTCATG 5488 Query 66486 TCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CACGCTGAC 66538 ||||| ||||||||||||| || ||| | |||| |||| || ||| | Sbjct 5487 AGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAATCCAACTGCATGCTCA- 5433 Query 66539 GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGAC 66598 ||| | |||||| | ||| |||| | || | | | || || || |||| Sbjct 5432 --TCTTCCTGAACCAGATCCGCCAGAAAGTGGGTATCCT---CTTTGGTTCGCCCGAGGT 5378 Query 66599 CACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCAT 66658 ||| ||||||||| ||| || | | |||||| || || || | || | || |||| Sbjct 5377 CACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCCGTGCGGCTCGACATTCGGCGCAA 5318 Query 66659 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAA 66718 ||| | ||||||||||| ||| ||||||||| | | || ||||||| ||| Sbjct 5317 GGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAA 5258 Query 66719 GAACAAGCTGGCCCCGCCG 66737 ||||||||| || ||||| Sbjct 5257 GAACAAGCTCGCGTCGCCG 5239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240927449617200