Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq191 194 2e-44 >seq191 Length=22522 Score = 194 bits (214), Expect = 2e-44 Identities = 505/761 (66%), Gaps = 12/761 (2%) Strand=Plus/Plus Query 34199 CGATACAACCTTCGGGGCGA-ATTT--CCGCTGCTGACGACGAAACGTGTGTACTGGAAG 34255 |||| ||| || || | | | |||| |||||||||||||| ||||| || | |||| Sbjct 15006 CGATTCAATCTGCGTGACAACATTTTCCCGCTGCTGACGACCAAACGCGTATTCTGGCGC 15065 Query 34256 GGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCG 34315 ||||| | || ||||||||||||||| | || || | ||| ||| ||||| | | | Sbjct 15066 GGCGTCGCGGAAGAGCTGCTGTGGTTCATCAGTGGCGACACAAACGCCAAGACGTTGCAG 15125 Query 34316 TCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG 34375 | ||| | | || ||||| | | | || || || | ||||| | || || Sbjct 15126 GACAAGGGCATCCACATTTGGGATGGTAATGGATCCAAGGAATACCTGGAGA-GCATCGG 15184 Query 34376 TTCCCATC-TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTT 34434 | | || ||| || | ||||| | || || || || || ||||||||| | ||||| Sbjct 15185 TCTCGGTCATCGTGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTT 15244 Query 34435 TGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCA 34494 ||| || |||| | | | || || || | || ||||||| ||||||||| Sbjct 15245 TGGTGCCAAGTACACGACCATGCACGCCGATTACACTGGCCAGGGAGTCGACCAGCTGGC 15304 Query 34495 GTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTG 34554 | | || || ||| | ||| |||||| | || | | ||| | |||| || || Sbjct 15305 GGAGGTCATTCACAAGCTCAAGACGAACCCAAACGATCGTCGCATCATCATGTCGGCATG 15364 Query 34555 GAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTA 34614 |||||| ||| ||| ||||||||| || ||||| |||| ||||||| ||||| Sbjct 15365 GAACCCTGCGGACCTCAAGGAGATGGCGCTGCCGCCGTGTCACATGTTCTGCCAGTTCTA 15424 Query 34615 CGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGG 34674 |||||| || || |||||||| || ||| | || || || || | |||||||| | || Sbjct 15425 CGTCGCCAACGGCGAGCTGTCGTGTCAGATGTACCAGCGCTCAGCTGACATGGGACTCGG 15484 Query 34675 GGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGG 34734 ||||| || ||||| || || ||||| ||| | || | ||||| || ||| || Sbjct 15485 CGTGCCTTTTAACATCGCGAGCTACGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGG 15544 Query 34735 GTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACAT 34794 | || | |||| || | | || ||| | || |||||||| |||||| ||||||| | Sbjct 15545 GCTGCGTGCTGGAGACTTCATCCACACGATCGGCGATGCGCACATCTACTTGAACCATGT 15604 Query 34795 CGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTAT 34854 || | ||| | | ||||| || || || | ||||| ||| || || | Sbjct 15605 GGAACCGCTTAAGGTTCAGCTCGGCCGCACCCCGCGGGCTTTCCCGACGCTGAAGATCAA 15664 Query 34855 TC--GAGCCG-TCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTA 34911 | ||| | || | |||||||| ||| ||||||||||| | ||||||| || Sbjct 15665 CCCAGAGAAGACCAACAGCATCGATGAGTTTGTCTTCGAGGACTTCGAGCTGGAAGGTTA 15724 Query 34912 CCGGCCGCACTCGGCCC--TGAAGATGGAGTTGGCGGTGTA 34950 | ||| || ||| | | ||||||| | || ||||||| Sbjct 15725 CAAGCCTCA--TGGCACGATCAAGATGGCGATGTCGGTGTA 15763 Score = 194 bits (214), Expect = 2e-44 Identities = 505/761 (66%), Gaps = 12/761 (2%) Strand=Plus/Minus Query 6395 TACACCGCCAACTCCATCTTCA--GGGCCGAGTGCGGCCGGTACCCTTCCAACACGAAGT 6452 ||||||| || | ||||||| | | ||| || ||| ||| ||||||| | |||||| Sbjct 15763 TACACCGACATCGCCATCTTGATCGTGCCA--TGAGGCTTGTAACCTTCCAGCTCGAAGT 15706 Query 6453 CCTCGCTCCTAAAGTCATCGATTGAGGTGA-CGGCTC--GAATAATTTTGAGCTGGGGGA 6509 ||||| ||| |||||||| | || | ||| | | || || ||| |||| Sbjct 15705 CCTCGAAGACAAACTCATCGATGCTGTTGGTCTTCTCTGGGTTGATCTTCAGCGTCGGGA 15646 Query 6510 ACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATAT 6569 | | || || || ||||| | | ||| | || | ||||||| |||||| | Sbjct 15645 AAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGT 15586 Query 6570 GCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCA 6629 ||||||| || | ||| || | | || |||| | || ||| ||| || ||||| | Sbjct 15585 GCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGA 15526 Query 6630 TGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCG 6689 || | ||| ||||| || || ||||| || ||||| || | |||||||| | | Sbjct 15525 GTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTG 15466 Query 6690 ATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGT 6749 | || || || | ||| || |||||||| || || ||||||||||| ||||||| ||| Sbjct 15465 AGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGT 15406 Query 6750 GGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCC 6809 | ||||| || ||||||||| ||| ||| |||||||| || |||| | ||| | Sbjct 15405 GACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGC 15346 Query 6810 TTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCT 6869 | || | |||||| ||| | ||| || || | | ||||||||| |||||| Sbjct 15345 GACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCT 15286 Query 6870 GTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACC 6929 | || | || || || | | | |||| || |||||||| | ||||||||| | Sbjct 15285 GGCCAGTGTAATCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGC 15226 Query 6930 CGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA-GATGGGAACCCCCGCTTGTCCAGAAAG 6988 | || || || || | ||||| | || ||| || | ||| || | ||||| | Sbjct 15225 CATACACTGGTCCGAGATCGCCAGCTTCACGATGACCGAGACCGATGC-TCTCCAGGTAT 15167 Query 6989 TCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTC 7048 || || || | | | ||||| || | | ||| | | | | ||||| ||| Sbjct 15166 TCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTT 15107 Query 7049 GTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTC 7108 ||| | || || | ||||||||||||||| || | ||||| |||| | || ||||| Sbjct 15106 GTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTG 15047 Query 7109 GTCGTCAGCAGCGG--AAAT-TCGCCCCGAAGGTTGTATCG 7146 |||||||||||||| |||| | | | || || ||| |||| Sbjct 15046 GTCGTCAGCAGCGGGAAAATGTTGTCACGCAGATTGAATCG 15006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448200293244480