Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq191 170 2e-37 seq1775 82.4 6e-11 >seq191 Length=22522 Score = 170 bits (188), Expect = 2e-37 Identities = 398/606 (66%), Gaps = 7/606 (1%) Strand=Plus/Minus Query 29634 CGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT 29693 ||||||||| | | ||||||||||| |||| | ||||| ||| ||||| || | |||| Sbjct 15627 CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 15568 Query 29694 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29753 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 15567 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 15508 Query 29754 AGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGC 29813 |||| ||||||||||| ||||| ||||| |||||||| |||| | |||||| | ||| | Sbjct 15507 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGAC 15448 Query 29814 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGG 29870 |||| ||||| |||| | ||||| ||||| | ||||| || ||||| || || | Sbjct 15447 ACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATG---TGACACGGCGGCAGCG 15391 Query 29871 CCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGT 29930 |||| | ||| |||||||| || ||| ||||||||| | || | ||||| Sbjct 15390 CCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGT 15331 Query 29931 TGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTG 29990 | || ||| || | | | | |||||| || || ||| || | ||| || | Sbjct 15330 TCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCTGGCCAGTGTAATCGG 15271 Query 29991 NNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30050 | || || | ||||||||| || ||||| ||||| | Sbjct 15270 CGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGA 15211 Query 30051 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30110 | || || |||| | || ||| || | | |||| | || |||| || || Sbjct 15210 GATCGCCAGCTTCACGATGACCGAGACCGATGCTCTCCAGGTATTCCTTGGATCCATTAC 15151 Query 30111 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30170 | ||||| || | | ||||| || | | |||| ||||||| || |||| || Sbjct 15150 CATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGA 15091 Query 30171 ACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGA 30229 ||||||||||||| ||| ||||| | ||| || || | |||||||| || || |||| Sbjct 15090 ACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGA 15031 Query 30230 AACTGT 30235 || ||| Sbjct 15030 AAATGT 15025 >seq1775 Length=5132 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 53525 CCAGAGATGGGCGACAAGTTT-GCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGGT 53583 || ||||| ||||||||||| ||| | |||||| || ||||| ||||| || | Sbjct 1052 CCCGAGATCGGCGACAAGTTCAGCAGTCGCCACGGC-CAGAAGGGCGTGTGCGGCACGAT 994 Query 53584 CCTGACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCA 53642 || | |||||||||||||| ||| || | ||||| || |||||| ||||| ||||| | Sbjct 993 CCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGT-GTGCCCGGACCTGATCATGA 935 Query 53643 ACCCCCACGCCTTTCCCTCCAGGATGACGGT 53673 |||| |||| || || | | |||||||| Sbjct 934 ACCCGCACGGTTTCCCGAGCCGCATGACGGT 904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406108332936424