Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq191 203 2e-47 >seq191 Length=22522 Score = 203 bits (224), Expect = 2e-47 Identities = 488/732 (67%), Gaps = 6/732 (1%) Strand=Plus/Minus Query 27003 CATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTT 27062 |||| |||| | || | | |||||| | |||||| ||||| ||| ||||| Sbjct 15755 CATCGCCATCTTGATCGTGCCATGAGGCTTGTAACCTTCCAGCTCGAAGTCCTCGAAGAC 15696 Query 27063 AAAGTCGTCCAGGCTCTCCACCCTC-CTG--TTTATCCTCAGTGT-GGGAAAGGGTCTGG 27118 ||| || || | ||| | | || ||| || ||| |||| || ||||||| || Sbjct 15695 AAACTCATCGATGCTGTTGGTCTTCTCTGGGTTGATCTTCAGCGTCGGGAAAGCCCGCGG 15636 Query 27119 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTC 27178 | | | | |||||||| ||| ||||||||||| || | || ||||| ||| || || | Sbjct 15635 GGTGCGGC-CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGC 15577 Query 27179 CCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 27238 | | ||||||| || ||||| | ||||| ||||| || || || | || | Sbjct 15576 CGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCA 15517 Query 27239 GGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGT 27298 || | |||||| ||||||||||| || || ||||| |||||||| | || | ||||| Sbjct 15516 ACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGT 15457 Query 27299 AGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAG 27358 | | ||||||||| ||||| || | | ||||| ||||| || | ||| ||||| | Sbjct 15456 ACATCTGACACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCG 15397 Query 27359 GAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 27418 | || ||||| | ||| |||||||| || ||| ||||||||| | || | Sbjct 15396 GCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGT 15337 Query 27419 CTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478 |||||| || ||| || | | | | |||||| || || ||| || | || Sbjct 15336 TTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCTGGCCAGTGT 15277 Query 27479 AGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCG 27538 | || | |||| |||||||| || || || || | ||| ||||| || ||||| | Sbjct 15276 AATCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACTG 15217 Query 27539 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAAC 27598 |||| || || || |||| | || ||| || | | |||| | || |||| | Sbjct 15216 GTCCGAGATCGCCAGCTTCACGATGACCGAGACCGATGCTCTCCAGGTATTCCTTGGATC 15157 Query 27599 CGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTC 27658 | || | ||||| || | | ||||| || | | |||| ||||||| || | Sbjct 15156 CATTACCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCAC 15097 Query 27659 TGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGA 27718 ||| ||||||||||||||| ||| ||||| | ||| || || | |||||||| || | Sbjct 15096 TGATGAACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTGGTCGTCAGCA 15037 Query 27719 G-GGGAAACTGT 27729 | |||||| ||| Sbjct 15036 GCGGGAAAATGT 15025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369457284658004