Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3662 109 5e-19 seq7085 84.2 2e-11 >seq3662 Length=2004 Score = 109 bits (120), Expect = 5e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || |||||||| ||||||||| ||||| ||||| Sbjct 235 CCACCACCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCC 176 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 || || ||||| |||| |||||||||||||||||||| ||||||||||| || |||| Sbjct 175 GAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCG 118 >seq7085 Length=619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || ||||| ||||||||| ||||| ||||| ||| Sbjct 94 CCACCACGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 35 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGA 41729 || ||||| |||| ||||||||||||||||||| Sbjct 34 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462239947780800