Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq152 100 2e-16 >seq152 Length=41146 Score = 100 bits (110), Expect = 2e-16 Identities = 187/272 (69%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAG-GCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATT 97061 || |||||||| | || |||| || ||| ||||| | |||| | || | |||| Sbjct 26666 AGCGTTGGGAACGCGCGTGGG-GTGCGCCCTAGCTGGACCTTGAGGGGCTCGACATGATC 26724 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || ||||||||||| || || | |||||||| || || || | | | || || Sbjct 26725 CAGGTAAATGTGAGCGTCCCCAATGGTGTGAATGAAGTCACCCGCCCGCAGTCCTGTAAC 26784 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || ||||||| | || || || | ||||| || ||||| || ||||| || || || Sbjct 26785 CTGCGCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCACACCGAGACC 26844 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 ||| |||||||| | ||||| | ||| || || |||| || || || |||||||| Sbjct 26845 CATGTCAGCTGAGCGCTGATACATCTGGCAAGACAGCTCACCGTCCGCGACGTAAAACTG 26904 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | || |||||||||| ||||||| Sbjct 26905 GCAGAACATGTGGCAGGGGGGCAGTGCCATTT 26936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346719918868340