Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3341 158 2e-33 >seq3341 Length=2704 Score = 158 bits (174), Expect = 2e-33 Identities = 378/565 (67%), Gaps = 15/565 (3%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || ||||| |||||||| || ||||| || | || | ||||| || | Sbjct 2079 ACAGCAGGCACGCGAAGTCGCAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGA 2020 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 32772 | |||| |||||||| ||||||||||| |||||||| || || || ||| || || | Sbjct 2019 AGCTGAGGCCGGGCATGAGGCCACGCTTCTTAAGCCAGAAGATCGAGCAAAAAGAACCCG 1960 Query 32773 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC------CGG 32826 | ||||| || || || || ||||| ||||| | || | ||| || ||| ||| Sbjct 1959 AGAAGAAGATGCCCTCGACGGCCGCGAAGGCGACAATGCGCTCCGCA-AACGCCGCGCGG 1901 Query 32827 CGC-TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 32885 ||| ||| | | |||||| ||||||| | ||||||||| | || ||||| || ||| Sbjct 1900 CGCGAGTC--GCA-CCACTTGAGAGCCCAGTGGGCCTTCTTCTGCACGCAAGGGATGGTC 1844 Query 32886 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 32945 || || || | || | ||| || || | || || | || || ||||| | Sbjct 1843 TCAATCGCGCGGAGAAGGTGGTTCTTCTCCGTCTGGTCCTTGATGTACGTGTCAATAAGC 1784 Query 32946 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTA 33005 || ||||| || || || ||||| || ||||| || || || ||||||||||| | Sbjct 1783 AGCGAATACACCTCAGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAACGC 1724 Query 33006 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTC 33063 ||||| | | ||| || || | | || |||| || | || || || || || | Sbjct 1723 GCCTCCGGGACCTGCACCTCGCTGCTGAA--GTTCATGGCGAGGTTCTCGTTGACAATGC 1666 Query 33064 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA 33123 |||||||||| ||||| ||||| | || || || || || || |||| || | Sbjct 1665 CGTCACTGGCGGCAAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGA 1606 Query 33124 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 33183 | || ||||| || |||| || | | ||| | ||||| | ||||| || | Sbjct 1605 GGTTGTTCCAGTCCTTGAGGTCGTGCACAAGATCGATCTCTTCGGCGGTCCAGAAGCTCG 1546 Query 33184 CCTCTGCCTTTTTATACATATTCCA 33208 |||| ||||| || ||||| | ||| Sbjct 1545 CCTCGGCCTTCTTGTACATCTGCCA 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633511910895200