Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2944 114 8e-21 seq200 89.7 3e-13 >seq2944 Length=3149 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || | || || ||||| || |||||||| Sbjct 3031 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 2972 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||||| || ||| Sbjct 2971 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 2912 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | ||||| || | ||| || || | || || || || ||||| || |||||||| Sbjct 2911 TCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACG 2852 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 2851 AAGATCTGCAT 2841 >seq200 Length=35225 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || | || || ||||| || ||||| || Sbjct 30915 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 30974 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||||| ||||| || Sbjct 30975 ATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGAC--AT 31032 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| | ||| || |||| || || || || || || |||||||| Sbjct 31033 --TGTCAATGCTATCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTT 31090 Query 34967 CACAAAGATCTGCATATT 34984 || ||||||||||| || Sbjct 31091 GACGAAGATCTGCATCTT 31108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324573611971536