Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq478 188 3e-43 >seq478 Length=18429 Score = 188 bits (208), Expect = 3e-43 Identities = 398/592 (67%), Gaps = 9/592 (2%) Strand=Plus/Minus Query 66146 GCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACG 66205 |||| || ||||| ||||||||||| || || || ||| | || || || | Sbjct 5511 GCCGCGTCGTGGAGATCTACGGCCCGGAGAGCTCGGGCAAGACGACGCTCGCGCTGAGCT 5452 Query 66206 CGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCC 66265 | || | |||||| || || ||| | ||| | ||||||||| ||||| || Sbjct 5451 GCATCGCGCAGGCGCAGCAGCAGGGCGGCGTCTGCGCGTTCATCGACGCCGAGCATGCCA 5392 Query 66266 TGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGC 66325 | ||| | | ||||||||| |||||| || ||| ||||| | ||| | |||| Sbjct 5391 TCGACGCGCACTACGCCAAGCAGCTCGGCGTCGACATCGACGAGCTCTACATCTCGCAGC 5332 Query 66326 CGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGT 66385 | ||| | ||||||||||| || ||||||| ||| ||||| ||| |||| || Sbjct 5331 CCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCTCGTGCGGTCGGGCGCCGTGG 5272 Query 66386 CCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 66445 | | |||||||| ||| ||||| || || ||||||||||||||||| |||||||| | Sbjct 5271 ACGTGGTCGTCGTCGACAGCGTGGCCGCGCTCGTGCCGCGCGCCGAGCTGGAAGGCGAGA 5212 Query 66446 TCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCA 66505 | || ||| || ||| ||||| ||||| |||||| ||||| |||||||||||| Sbjct 5211 TGGGCGACCAGCAGATCGCGCTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCA 5152 Query 66506 CCGGCACCATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 66562 | ||| | | || |||| || ||| | ||| | |||||| | ||| ||| Sbjct 5151 CGGGCTCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTTCTGAACCAGATCCGCCAGA 5095 Query 66563 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGT 66622 | | |||| | | || |||| || ||| ||| ||||||| | ||| || | | Sbjct 5094 AAGTGGGCATCAT---CTTCGGCTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCT 5038 Query 66623 TCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGG 66682 |||||| || || || | || | || |||| || | ||||||||||| ||| Sbjct 5037 ACTACGCGTCCGTGCGGCTCGACATTCGCCGCAAGGCGGCGATCAAGGAAGGCGACAAGG 4978 Query 66683 CTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCC 66734 ||||||||| | | || || || | |||||||||||| || |||| Sbjct 4977 TCGTCGGCAACGAGATCGTCGTCAAGGTGGCCAAGAACAAGCTCGCATCGCC 4926 Score = 170 bits (188), Expect = 9e-38 Identities = 340/500 (68%), Gaps = 13/500 (3%) Strand=Plus/Minus Query 66240 CGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGA 66299 ||| | ||||||||| ||||| || | ||| | | ||||||||| |||||| || || Sbjct 10578 CGCGTTCATCGACGCCGAGCATGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCGA 10519 Query 66300 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66359 | ||||| | ||| | ||||| ||| | ||||||||||| || ||||||| || Sbjct 10518 CATCGACGAGCTCTACATCTCCCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCGGA 10459 Query 66360 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTG 66417 | || || ||| |||| | ||| | | |||||||| ||| ||||| || || Sbjct 10458 CACGCTTGTGCGGTCGGGCG--CCGTCGACGTGGTCGTCGTCGACAGCGTGGCCGCGCTT 10401 Query 66418 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 66477 ||||||||||||||| | |||||||| || || ||| || ||| ||||| ||||| Sbjct 10400 GTGCCGCGCGCCGAGTTGGAAGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGG 10341 Query 66478 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA---CACGCTG 66534 |||||| ||||| ||||||||||||| ||| | | || |||| || ||| Sbjct 10340 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGGCTCGCTGAGCAAGTCCAACTGCATGCTC 10281 Query 66535 ACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAG 66594 | ||| | |||||| | ||| |||| |||||| | | || ||| || ||| Sbjct 10280 A---TCTTTCTGAACCAGATCCGCCAGAAAGTCGGCATCAT---CTTTGGCTCGCCCGAG 10227 Query 66595 ACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGC 66654 ||| ||||||| | ||| || | | |||||| || ||||| | || | || ||| Sbjct 10226 GTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCCGTCCGGCTCGACATTCGCCGC 10167 Query 66655 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTC 66714 | || | || || ||||| ||| ||||||||| | | || || || | | Sbjct 10166 AAGGCGGCGATCAAAGAGGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTGGCC 10107 Query 66715 AAGAACAAGCTGGCCCCGCC 66734 ||||||||||| || |||| Sbjct 10106 AAGAACAAGCTCGCGTCGCC 10087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242691145573110