Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq152 179 4e-40 >seq152 Length=41146 Score = 179 bits (198), Expect = 4e-40 Identities = 407/604 (67%), Gaps = 16/604 (3%) Strand=Plus/Plus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| | || |||||||| || || | ||||| | ||| |||||||| | |||||| Sbjct 26696 AGCTGGACCTTGAGGGGCTCGACATGATCCAGGTAAATGTGAGCGTCCCCAATGGTGTGA 26755 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 | ||||| |||| | || || || || || || | || || | || | |||| Sbjct 26756 ATGAAGTCACCCGCCCGCAGTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAG 26815 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 || || ||||||||||| || || || |||||||| | || | ||| |||| |||||| Sbjct 26816 CTCGCGATGTTGAAGGGCACACCGAGACCCATGTCAGCTGAGCGCTGATACATCTGGCAA 26875 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || ||||| ||||| || |||||||||||||| | |||||||| || ||||| ||||| Sbjct 26876 GACAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATT 26935 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 | || || || |||||||| || || | | | || | | | || || || Sbjct 26936 TCCTTGAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTTGTC 26995 Query 147208 TTAATCTCTTCGATAACCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGT 147263 | || || || || |||||| |||||||| |||||||| || |||| | | Sbjct 26996 T---TCAGTTTGAGAA-TCACCTCGGCAAGCTGGTCGACGCCCTGACCAGTGTAG-TCGG 27050 Query 147264 CCCGCA--GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCC 147321 | ||| || | |||| | || || ||||| | |||||||||||||||||| || || Sbjct 27051 CGTGCATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCG 27109 Query 147322 AGGTCGCCGGGCTTTC--TGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGT 147379 ||||| |||| | | || ||||| || | | |||| | || ||||| | Sbjct 27110 AGGTCTCCGGCTTCACGATGACCGAGA--CCAATGCTTTCGAGATATTCCTTTGACCCAT 27167 Query 147380 GGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGA 147439 | | |||||||| | |||||| | ||| ||| | || ||| || | || Sbjct 27168 TGCCATCCCAGATTTTGATGCCCTTGTCCTGTAGCGTCTTGGCGTTGGTGTCACCACTGA 27227 Query 147440 TGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGG 147499 ||||||| | ||| ||||| ||| || | ||| || || | ||||| || || || | Sbjct 27228 TGAACCACAACAGTTCCTCTGCAACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTG 27287 Query 147500 GGAA 147503 | || Sbjct 27288 GAAA 27291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583377414436800