Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3341 105 9e-18 >seq3341 Length=2704 Score = 105 bits (116), Expect = 9e-18 Identities = 365/562 (65%), Gaps = 23/562 (4%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| |||||||| || || ||||||||||| | || | ||||| || || |||| Sbjct 2072 GCACGCGAAGTCGCAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGAAGCTGAG 2013 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA-GATCCAGAAAAGA 39734 || ||||| || |||||||| || ||||| || || | ||||||| || || || |||| Sbjct 2012 GCCGGGCATGAGGCCACGCTTCTTAAGCCAGAAGATCG-AGCAAAAAGAACCCGAGAAGA 1954 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTA 39790 ||||||| || || || || || || |||| | ||||| || | | | | Sbjct 1953 AGATGCCCTCGACGGCCGCGAAGGCGACAA--TGCGCTCCGCAAACGCCGCGCGGCGCGA 1896 Query 39791 -TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849 | |||||| | ||||| | || ||||||| || ||||| || || || || || Sbjct 1895 GTCGCACCACTTGAGAGCCCAGTGGGCCTTCTTCTGCACGCAAGGGATGGTCTCAATCGC 1836 Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCT-----TTAACATATGTATCTATTAACAGA 39904 || || || ||| || | ||| || | || || || || | ||| Sbjct 1835 -----GCGGAGAAGGTGGTTCTTCTCCGTCTGGTCCTTGATGTACGTGTCAATAAGCAGC 1781 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 ||||| || || |||||||| || || || ||||| || ||||| || || | || Sbjct 1780 GAATACACCTCAGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAACGCGCC 1721 Query 39965 TCAGTAATTTGTACCT--CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 || | | || |||| ||| || || | || | || || || || || || | Sbjct 1720 TCCGGGACCTGCACCTCGCTGCTGAAGTTCAT--GGCGAGGTTCTCGTTGACAATGCCGT 1663 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATT 40082 |||| |||||||| || || | || || || || || || || | | || | | Sbjct 1662 CACTGGCGGCAAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAGGT 1603 Query 40083 TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCT 40142 | |||||||| |||| || | | ||| | ||||| || ||||| || ||||| Sbjct 1602 TGTTCCAGTCCTTGAGGTCGTGCACAAGATCGATCTCTTCGGCGGTCCAGAAGCTCGCCT 1543 Query 40143 CTGCCTTTTTGTACATGTTCCA 40164 | ||||| |||||||| | ||| Sbjct 1542 CGGCCTTCTTGTACATCTGCCA 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686778613609680