Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq81 96.9 1e-14 >seq81 Length=54637 Score = 96.9 bits (106), Expect = 1e-14 Identities = 463/717 (65%), Gaps = 32/717 (4%) Strand=Plus/Plus Query 254813 TGCTACCTACTGACCATCAGTGAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGA 254872 |||| ||| ||| |||| | || ||| ||| | ||||||| ||| ||||| || Sbjct 8585 TGCTTCCTGCTGGCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAG 8644 Query 254873 TGCGCATTCGTGAGTCAATCGAGCGGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCC 254932 ||||| | | | | | | ||||||| | || | | | | |||| | |||||| Sbjct 8645 TGCGCCTGCATCTCCAAGTGGGCCGGCGGCATCGGTGTGAGCGTGCACAACATCCGCGCC 8704 Query 254933 AGCGGCACACCGATTCGCTCGACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGT 254992 | | | | || ||| |||||||| | |||| | | || ||| |||| Sbjct 8705 ACCAACTCGTACATCCGCGGCACGAACGGCTCGTCGAACGGCCTCGTGCCGATGCTCCGC 8764 Query 254993 GTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTC 255052 ||||||||| || ||| |||||||| || || || |||||||| ||| || ||||| Sbjct 8765 GTGTTCAACGACACGGCGCGCTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTC 8824 Query 255053 ACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAG 255112 |||| ||||| |||||||||||||| ||||| ||| | || | | ||| Sbjct 8825 GCCATGTACCTCGAGCCGTGGCACGCGGACATCTTCGAGTTCCTCGACCT---CAAGAAG 8881 Query 255113 ACCGGCACCG--AGGAGCT-GATC--GCCCGCGACATCTACACCGCTGTCTGGTGCTGCG 255167 | | ||| | | ||||| ||| || ||||| | | | ||| | ||| | | Sbjct 8882 AAC--CACGGAAACGAGCTCCATCGTGCTCGCGATCTGTTCTACGCCATGTGGATCCCGG 8939 Query 255168 ATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGGAGCCTCATGTGTCCCAACT 255224 |||| || ||| ||||| || | | | |||| ||||||||| | || || ||| Sbjct 8940 ATCTCTTCATGAAGCGCGTCGAGGCCAACGGCGAG---TGGAGCCTCTTCTGCCCGAACG 8996 Query 255225 TATCGCCCGG--TCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAGTA 255282 | || || |||| ||| | ||||| |||||||| || ||||| | |||| Sbjct 8997 AGGCCCCGGGGCTCTACACGA--CGTGGGGCGACGAGTTCGAGGCGCTGTACCACCAGTA 9054 Query 255283 CGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGATGG 255341 |||| | ||||| | || | | | | | | |||| || || ||||| | |||| Sbjct 9055 CGAGAAGGAGGGCCGCGCGCGCAAGACGA-TCCGCGCGCAGCAGCTCTGGTTCGCGATCC 9113 Query 255342 TGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-CACATAAACGC 255399 | || | ||| | || || || | ||||| | | || |||| ||| | || ||| Sbjct 9114 T-CGAGTCTCAGATCGAGACGGGCACGCCGTACATGCTGTACAAGGACTCGTGCAACCGC 9172 Query 255400 ACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCG---AACCTGTGCACCGAGAT 255456 | ||||||||| | ||| ||| ||||| | ||||| ||||| ||| |||| | Sbjct 9173 A-AGTCGAACCAGCAGAACCTCGGCACGAT---CCGCTCGAGCAACCTTTGCTGCGAGGT 9228 Query 255457 TACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCATCTCGCT 255513 | ||||||| || | ||||| ||||| |||||| | ||||||||| |||| Sbjct 9229 GCTCGAGTACACGTCGCCGGACGAGGTCGCCGTGTGCAACCTCGCGTCCATCGCGCT 9285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588027444885090