Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq152 114 1e-20 >seq152 Length=41146 Score = 114 bits (126), Expect = 1e-20 Identities = 186/268 (69%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515 || |||| || || ||||| | |||| || || | ||||| |||||||| || || Sbjct 26696 AGCTGGACCTTGAGGGGCTCGACATGATCCAGGTAAATGTGAGCGTCCCCAATGGTGTGA 26755 Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575 ||||| ||||| | || ||||| | || || |||| ||||| | |||| Sbjct 26756 ATGAAGTCACCCGCCCGCAGTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAG 26815 Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635 || || | || || || ||||| ||||||||||| ||||| | ||| |||| |||||| Sbjct 26816 CTCGCGATGTTGAAGGGCACACCGAGACCCATGTCAGCTGAGCGCTGATACATCTGGCAA 26875 Query 118636 GAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 || ||||| |||| || || |||||||| | | ||||| || || ||||| |||| Sbjct 26876 GACAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATT 26935 Query 118696 GAACTCAGTTGGGCAGGATTCCAGGCTG 118723 | || | ||| || ||||| |||| Sbjct 26936 TCCTTGAGATCGGCCGGGTTCCATGCTG 26963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414400210127368