Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq152 196 4e-45 >seq152 Length=41146 Score = 196 bits (216), Expect = 4e-45 Identities = 432/641 (67%), Gaps = 10/641 (2%) Strand=Plus/Plus Query 27090 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 27148 ||| |||| ||| || ||||| | | |||| | | | | ||||| ||| || || | Sbjct 26656 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGGACCTTGAGGGGCT 26714 Query 27149 CCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTA 27208 | || ||||||||||| | ||||||||| || | |||||| | || || |||| | Sbjct 26715 CGACATGATCCAGGTAAATGTGAGCGTCCCCAATGGTGTGAATGAAGTCACCCGCCCGCA 26774 Query 27209 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 27268 | || || || || || |||| ||| | ||| | |||||| |||||||| ||||| | Sbjct 26775 GTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCA 26834 Query 27269 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTA 27328 | ||||| |||||||| | || | ||| || | ||| || || ||||| || || | Sbjct 26835 CACCGAGACCCATGTCAGCTGAGCGCTGATACATCTGGCAAGACAGCTCACCGTCCGCGA 26894 Query 27329 CGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGT 27388 |||||||||| || | |||||| || || || ||||| | || |||| Sbjct 26895 CGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATTTCCTTGAGATCGGCCGGGT 26954 Query 27389 TCCAGGCGCACACGATGATGCGCCTGTC-TTCTGGGTTG--TTCCTGATGAGGTCCACGG 27445 |||| || ||| ||| ||||| | ||| ||| | ||| ||| |||| ||| Sbjct 26955 TCCATGCTGACATGATTATGCGACGGTCGTTCGGATTTGTCTTCAGTTTGAGAATCACCT 27014 Query 27446 CGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 || || ||||| || || ||| || | |||||| | ||| |||||||| | Sbjct 27015 CG----GCAAGCTGGTCGACGCCCTGACCAGTGTAGTCGGCGTGCATCGTCGTGTACTTT 27070 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || ||||| || | ||| ||||| |||||||||||||| |||||||| |||| | || Sbjct 27071 GCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGTCTCCGGCTTCACGATGA 27130 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 ||| || | | || | | | || | || || ||| | |||||||| || | ||| Sbjct 27131 CCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATGCCC 27190 Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684 || || ||| |||| ||| ||| || |||| |||||||| ||| ||||| | Sbjct 27191 TTGTCCTGTAGCGTCTTGGCGTTGGTGTCACCACTGATGAACCACAACAGTTCCTCTGCA 27250 Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || | ||| || || | |||||||| || || ||||| Sbjct 27251 ACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTGGAAA 27291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369438919919222