Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq43 91.5 1e-13 >seq43 Length=178053 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||| || |||| ||| || ||||| ||||| || || || || | || Sbjct 81043 ATGGCGCTCCCTCCGTGCCACATGTTCTGCCAGTTCTACGTCGCGAATGGCGAGCTCTCG 81102 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 |||||| | |||||| |||||| || |||||||| || || ||||| || || || | Sbjct 81103 TGCCAAATGTACCAGCGATCGGCTGACATGGGCCTCGGTGTGCCGTTTAATATCGCCAGT 81162 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || | | ||| | | || || || | || || || |||| || || | Sbjct 81163 TACGCGTTGTTGACCCGATTGATCGCTCAGGTCGCTGGGCTCAAGGCCGGTGACTTCGTC 81222 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || |||||||| || ||||||||||| Sbjct 81223 CATGTCATTGGTGATGCACACATCTACTTGAATCA 81257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399500474876580