Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq43 197 2e-45 >seq43 Length=178053 Score = 197 bits (218), Expect = 2e-45 Identities = 408/601 (68%), Gaps = 6/601 (1%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||||| ||| || ||||| | ||| || | ||||| ||| || || || | ||| || Sbjct 81282 CAACTGGATCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATG 81223 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 || |||||| |||| || ||| || | || || |||| || ||||| || | ||| Sbjct 81222 GACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTA 81163 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||||| || || || ||||| || || |||||||| |||| |||||||||| ||||| Sbjct 81162 ACTGGCGATATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCA 81103 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||| || ||| |||||||||||||| | | |||||| || || || ||||| Sbjct 81102 CGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAACATGTGGCACGGAGGGAGCGCCAT 81043 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT 145970 | ||||| || || ||||| || | | || | | || | | ||||| | Sbjct 81042 CTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGGT 80983 Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 ||| | || || | || |||||| ||||| ||||| || |||||| | | | Sbjct 80982 CTTAAGCTTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATC-GGCGT 80924 Query 146031 GGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 | | || ||| ||| || ||||| | ||||||||| || || || || || || | Sbjct 80923 GCATATCGGTATACTTGGCACCAAAGTGACGCCACTGGAAGCCATACACTGGACCGAGAT 80864 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | || | || | || || || ||| | | ||| | ||| || || ||| ||| Sbjct 80863 CGCCTGCTTCGCGATGACCGAGACCGATGCTTCCTAGGTATTCCTTCGATCCATTGCCGT 80804 Query 146150 CCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 |||| || | | | || || |||||| || |||| | |||| || |||||||| Sbjct 80803 CCCAAATATGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAA 80746 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | ||||||||| || || | |||||| || | ||| || || |||| ||||| Sbjct 80745 CCACAACAGCTCTTCTGCAACGCCACGCCAGAACACGCGCTTCGTCGTGAGCACCGGGAA 80686 Query 146268 C 146268 | Sbjct 80685 C 80685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071459804960