Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq715 131 2e-25 >seq715 Length=275277 Score = 131 bits (144), Expect = 2e-25 Identities = 305/454 (67%), Gaps = 11/454 (2%) Strand=Plus/Minus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 ||| || ||||| || ||||| ||||| ||||| | ||| || | ||||| || || | Sbjct 111259 CAAGCAGGCGAAGTCACAGTGGAGACCTTCGTCACGACTGATAAGCTCGTTCGAGAAGCT 111200 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAA 36272 ||| || ||||| || |||||||| || ||||| || | || ||| || || || || | Sbjct 111199 GAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGACCGA-GCAGAACGAACCCGAGA 111141 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT 36332 |||| || || || | || || ||||| | | | ||| || | |||| | || | Sbjct 111140 AGAAGATACCCTCAATGGCAGCGAAGGCGACGACACGCTCAGCAAACGCGGCGTTCTC-T 111082 Query 36333 GTATC----CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 | || || | ||||| | ||||||||| | || || || |||||||| || Sbjct 111081 GAGTCACACCAGCGGAGCGCCCAGTTGGCCTTCTTCTGCACGCATGGGATTGTCTCAATG 111022 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 || || | | ||| || || ||| || | || || |||||||| || Sbjct 111021 GCGCGGAACAAGTGGTTCTTCTCGGCGGCATCCTTGATGTACGTGTCAATCAACAGCGAG 110962 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 ||||||||||| || ||||| |||||||| || || || |||||||| || | || || Sbjct 110961 TACATTTCCGAGTGGATGTTCTCAATGGCAATCTGGAAGCCGTAGAAGCAGCGGGCTTCA 110902 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCGTCAC 36566 | | ||| ||||| | | || |||| || | || || ||||| || || |||| Sbjct 110901 GGCACCTGGACTTCGTTGCTGAA--GTTCATGGCAAGGTTCTCGTTCACAATACCATCAC 110844 Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAA 36600 |||| || || ||||| | || || || || || Sbjct 110843 TGGCAGCGAAGAACGCGAGCACGTGCTTGATGAA 110810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658166843536160