Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq43 167 2e-36 >seq43 Length=178053 Score = 167 bits (184), Expect = 2e-36 Identities = 310/451 (69%), Gaps = 8/451 (2%) Strand=Plus/Minus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 ||| |||||||| || || | | || ||| | | || || || | ||| || ||| Sbjct 81306 CGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGATTCAAGTA 81247 Query 20948 AACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGC 21007 | ||| || ||||| | | || || ||||| || | | || || | ||| ||||| Sbjct 81246 GATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGC 81187 Query 21008 GATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTC 21067 ||||| |||| | ||||| |||||||| |||||||| || |||||||||||||| Sbjct 81186 GATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCCATGTC 81127 Query 21068 GGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAA 21127 || || | |||||||| ||||| || ||||| || || ||||| ||||| || || Sbjct 81126 AGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAA 81067 Query 21128 AACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAAC 21187 | ||| || |||||||| |||||| | |||||| || || ||||| || ||| | Sbjct 81066 CATGTGGCACGGAGGGAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAG 81007 Query 21188 GATGCGCCGATCGTGGGGCCGCCTGTTAA----TTAGATCCACCACGTAACGCAGCTGGT 21243 || ||||| |||| || | |||| | ||| ||| | | || ||||| | Sbjct 81006 AATACGCCGGTCGTTCGGGTTGGTCTTAAGCTTGTGGAT-GACCTC--AGCG-AGCTGAT 80951 Query 21244 CCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCC 21303 |||| |||||||| ||| | ||||| | | |||| || ||||| || | || Sbjct 80950 CCACACCCTGACCGGTGTAATCGGCGTGCATATCGGTATACTTGGCACCAAAGTGACGCC 80891 Query 21304 ACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 ||||||| || ||||| || || |||||||| Sbjct 80890 ACTGGAAGCCATACACTGGACCGAGATCGCC 80860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427772225411520