Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq598 96.9 5e-15 >seq598 Length=3624 Score = 96.9 bits (106), Expect = 5e-15 Identities = 367/571 (64%), Gaps = 4/571 (1%) Strand=Plus/Minus Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156 ||||| || | || | |||| | | || || | ||||| || |||||||| ||||| Sbjct 3059 TTCTTCTTCAAGTCCAAGAACTCGAAGATGTCCGCGTGCCATGGCTCCAAGTAGATGGCG 3000 Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216 | ||| || ||| ||| ||||| || | ||| | ||| |||| || | || Sbjct 2999 AACGAACCCTTGCGCTTGCCTCCGCCCTGGTCAACGTAGCGAGCCGTGTCGTTGAACACA 2940 Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276 | ||||||||||| | |||||| || | || || || ||| || || || | || Sbjct 2939 CGCAACATTGGAACGAGACCATTCGACGATCCGTTCGTACCGCGAATGTAACTGTTAGTG 2880 Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336 ||||| || ||| || | ||| || || || ||| || ||||| | ||||| Sbjct 2879 GCACGGATGTTGTGCATGCTGACACCGATACCACCGGCCCACTTGGAGATGCAAGCGCAG 2820 Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396 || | ||| |||||||| ||||| || |||||| |||| ||| | || || Sbjct 2819 TTCTTGAGCGTGTCATAGATACCCTCGATGGAGTCATCCTTCATAGCAAGCAAGAAGCAC 2760 Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456 || | || ||||| || || || || || ||||| || | |||||||| || Sbjct 2759 GACGATAGCTGAGGACGAGGCGTACCAGCGTTGAACAAGGTTGGCGTCGCGTGCGTGAAG 2700 Query 72457 CATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTA 72514 | || | |||| ||| | ||| ||||| | || | | || || | ||| || | Sbjct 2699 AAGTTCTGGGACATGTA-TTCGTAGGTCTCGAGCGCCGCCGCAATGTCTTCCTTG-TGGA 2642 Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574 | || | ||||||| | ||| ||||| || | || | | |||| | || Sbjct 2641 TACCAATGCTCACACGCAAAATCATCTGCTGTGGACGCTCCATCACCTTGCCACCAATGC 2582 Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634 || |||||| || || || | || || || ||||| |||| ||| ||||| || | Sbjct 2581 GCAGCAAGTACGACTTCTCAAGCGTCTTGAAGCCAAAGTAGTCGTACTCGAAGTCACGGT 2522 Query 72635 CGTAAATAATAACCGAATTGAGTTTATCCTT 72665 ||| || ||| |||| |||| ||||||| Sbjct 2521 CGTGGATGATAGCCGAGTTGAACATATCCTT 2491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671133126190240