Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq52 82.4 6e-11 >seq52 Length=165522 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||| |||||||| || ||||||||||| | | ||| ||||| Sbjct 29008 AGCACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCC 28949 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || | ||||| || || ||| | ||||| ||||| Sbjct 28948 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 28889 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||||||||| | | | | | ||| ||||| || | ||||| || Sbjct 28888 TGGATCTTCTGCTTCACGTTGTCAATCGAGTCCGAAGGCTCGACGTCAAGCGTGATCGTC 28829 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCCTT 16946 || || |||| ||| || || || |||||||| |||| | ||| Sbjct 28828 TTACCCGTCAACGTCTTCACGAAGATCTGCATCTTGTTGTCTT 28786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084425604760