Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq56 118 9e-22 seq52 113 4e-20 >seq56 Length=164687 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 ||||||||||| || ||||| || ||| | || || || || |||| || || || || Sbjct 65520 GTAAAGATGCAGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACGCTCGATGTCGAG 65579 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | || | | | ||| | |||| || || || || |||||||| || |||||||| Sbjct 65580 CCATCGGACAGCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGAATTCCACCA 65639 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || ||||| || || |||||||| ||| | ||||| |||||| |||| || Sbjct 65640 GACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGAC 65699 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || || || || ||| | || || || Sbjct 65700 TACAACATCCAGAAGGAGTCGACCTTGCACTTGGT 65734 >seq52 Length=165522 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || || || ||||| ||| |||| ||||| || || | Sbjct 28794 AAGATGCAGATCTTCGTGAAGACGTTGACGGGTAAGACGATCACGCTTGACGTCGAGCCT 28853 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | ||| | | || || || || || ||||||||||||||||| || ||| Sbjct 28854 TCGGACTCGATTGACAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCAGAT 28913 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || | || ||||| ||||| ||| | ||||| |||||| |||| || ||| Sbjct 28914 CAGCAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCGGACTAC 28973 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || || | || || || | || ||||| || || Sbjct 28974 AACATCCAGAAGGAGTCTACGTTGCACTTGGTGCTCCGCTTGCGTGGTGG 29023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724296425060