Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq159 145 4e-30 >seq159 Length=79683 Score = 145 bits (160), Expect = 4e-30 Identities = 394/591 (67%), Gaps = 23/591 (4%) Strand=Plus/Plus Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 || || |||||||||||||| || ||| || || ||| | |||||| || | | | Sbjct 15036 CGTGTCGTGGAGATCTACGGACCAGAGAGCTCGGGTAAGACCACGTTG-GCGTTGAGTTG 15094 Query 66033 G-TGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCT 66091 | || | |||||||| |||||||| | ||||| ||||||||||| || | | Sbjct 15095 TATCGCAGAAGCCCAGAAAACCGGTGGCGTCTGCGCCTTTATCGACGCCGAGCACGCCAT 15154 Query 66092 CGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGC-AGC 66150 ||| | | | ||| | ||||| || | | ||| | || || | | | ||| Sbjct 15155 TGACGCCCACTGGGCCAAGCAACTCGGTGTCAACATTGACGA-CTTGTACATTTCCCAGC 15213 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGA--CCTTC--TCG-TCAAGTCTGGCGA 66205 ||||| |||| ||||||||||| |||||| || | || ||| || || | || Sbjct 15214 CAGACTCTGGTGAGCAGGCCCTCGAGATCACGGATACGTTGATTCGATCCGGT--GCCGT 15271 Query 66206 GGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGG 66265 || | || | || || ||| ||| ||||| |||||||| ||||| ||||||||||| Sbjct 15272 GGATC---TCGTGGTCGTCGACAGTGTCGCGGCGCTGGTGCCACGGGCCGAGCTCGAAGG 15328 Query 66266 GGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAA 66325 || || |||||| | || ||| |||| ||||| || ||| |||||| ||||||| Sbjct 15329 CGAGATGGGGGACCCCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTGCGCAA 15388 Query 66326 GCTGACCGGCACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCG 66382 ||| || ||| || | ||| |||| || ||||| | | | |||||| | || Sbjct 15389 GCTCACGGGCTCGCTCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCG 15445 Query 66383 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCT 66442 ||||| |||| | | | || ||| || ||| |||| | ||||| | ||| || Sbjct 15446 TCAGAAGGTCGGGATCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACT 15502 Query 66443 GCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGA 66502 || | |||||| ||||||||| | ||| | || | | || | ||||||||||| Sbjct 15503 CCGTTACTACGCGTCGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGA 15562 Query 66503 TGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553 || || ||||| | || ||||| | ||||||||||||||| Sbjct 15563 CATGGTCGTGGGCAATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGC 15613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242468260501808