Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq176 233 2e-56 seq598 228 8e-55 >seq176 Length=73234 Score = 233 bits (258), Expect = 2e-56 Identities = 512/763 (67%), Gaps = 8/763 (1%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || |||||| |||| || || || ||| |||| ||||||||| || | | Sbjct 72326 CCAACTCTTTTCAACTCGGGTACGCCACGCCCTCAGTTGTCGTCGTGTTTCTTGCTTGCC 72385 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||||| || || | ||||| |||||| |||| || | ||||| Sbjct 72386 ATGAAGGATGACTCCATTGAGGGTATCTACGACACGCTCAAGAACTGCGCATCTATCTCC 72445 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | || || || ||||| |||||| | ||| || | ||||||| ||||| Sbjct 72446 AAGTGGGCCGGTGGCATCGGTATCAGTATGCACAACATCCGTGCCACTAACAGTTACATT 72505 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || | || || || ||||| || ||| | || || |||||| || || Sbjct 72506 CGCGGTACGAACGGATCGTCGAATGGTCTCGTTCCAATGTTGCGTGTGTTCAACGACACG 72565 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| |||||||| || || | | | |||||||| ||||| |||| | ||| Sbjct 72566 GCTCGCTACGTTGACCAGGGCGGAGGCAAGCGCAAGGGTTCGTTCGCCATCTACTTGGAG 72625 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||||||| | | ||| | ||| || ||||||||||| || || || Sbjct 72626 CCATGGCACGCGGACATCTTCGAGTTCTTGGACTTGAAGAAGAACCACGGTAATGAGCTC 72685 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | |||||||| |||| | ||| | ||||| | || ||||| || || Sbjct 72686 CATCGTGCTCGTGACCTCTTTTACGGGTTGTGGATCCCAGATTTGTTCATGAAGCGTGTG 72745 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||| ||| | |||||| | || || || || ||| || || || | ||| Sbjct 72746 GAGGCGAACGGTGAATGGAGTTTGTTCTGCCCAAACGAAGCTCAAGGTCTCTACGAGTGC 72805 Query 94378 TGTGGATCGCGTTTTGAAGAC-TTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436 || || | | || |||| ||||| || || ||| | |||| ||||| | || Sbjct 72806 TGGGGCGAG-GAGTTCGAGACGTTGTACGCCAAGTATGAAGCTGAGGGAAAGGCTCGCAA 72864 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 | || |||| | |||| ||| ||| | || |||| | ||||||||||| Sbjct 72865 GACCATCCGTGCTCAGCAGCTCTGGTTCGCCATCCTCGAGTCACAGATCGAGACGGGTAC 72924 Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 ||| || || ||| |||||| | | || |||||| ||||||||| ||||||| Sbjct 72925 GCCGTATATGCTGTACAAGGATGCGGCGAATCGCAAGTCGAACCAGCAGAACCTCGGTAC 72984 Query 94557 GATCAAGAGCTCG---AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||| ||||| || ||||| ||| | ||||||| || | |||| ||| | Sbjct 72985 GATC---CGCTCGAGCAACTTGTGCTGTGAGGTGATCGAGTACACAGATTCGGATGAGGT 73041 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTG 94656 |||||||| ||||| | || ||| ||| | | |||||| Sbjct 73042 CGCTGTGTGCAACCTTGCGTCGATCGCCCTACCGAAGTTCGTG 73084 >seq598 Length=3624 Score = 228 bits (252), Expect = 8e-55 Identities = 602/915 (66%), Gaps = 8/915 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| |||||| || || |||||||||||| | || || | ||||| | Sbjct 2536 TACGACTACTTTGGCTTCAAGACGCTTGAGAAGTCGTACTTGCTGCGCATTGGTGGCAAG 2595 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || ||| || | |||| || ||| || || ||| | ||| Sbjct 2596 GTGATGGAGCGTCCACAGCAGATGATTTTGCGTGTGAGCATTGGTATCCACAAGGAAGAC 2655 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || || | | | | | | | ||||| | || | || || || Sbjct 2656 ATTGCGGCGGCGCTCGAGACCTACGAATACATGTCCCAGAACTTCTTCACGCACGCGACG 2715 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||| |||||||||| || || || || ||| | || ||||| ||| || | | Sbjct 2716 CCAACCTTGTTCAACGCTGGTACGCCTCGTCCTCAGCTATCGTCGTGCTTCTTGCTTGCT 2775 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||||||||| || || | |||| |||||| |||| || |||||| Sbjct 2776 ATGAAGGATGACTCCATCGAGGGTATCTATGACACGCTCAAGAACTGCGCTTGCATCTCC 2835 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | || || || ||||| |||| | ||| || | ||||||| ||||| Sbjct 2836 AAGTGGGCCGGTGGTATCGGTGTCAGCATGCACAACATCCGTGCCACTAACAGTTACATT 2895 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || | || || || ||||| || ||| | || || |||||| || || Sbjct 2896 CGCGGTACGAACGGATCGTCGAATGGTCTCGTTCCAATGTTGCGTGTGTTCAACGACACG 2955 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| |||||||| || || | | | |||||||| ||||| |||| | ||| Sbjct 2956 GCTCGCTACGTTGACCAGGGCGGAGGCAAGCGCAAGGGTTCGTTCGCCATCTACTTGGAG 3015 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||||||| | | ||| | ||| || ||||||||||| || || || Sbjct 3016 CCATGGCACGCGGACATCTTCGAGTTCTTGGACTTGAAGAAGAACCACGGTAATGAGCTC 3075 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | || | |||||||| | ||| | ||||| | || ||||| || || Sbjct 3076 CACCGTGCTCGTGATTTATTCTACGCGTTGTGGATCCCAGATTTGTTCATGAAGCGTGTG 3135 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 || ||| || ||||||| | || || || || || || || || | | | Sbjct 3136 GAATCGAACGGCGACTGGAGTTTGTTCTGCCCGAACGAGGCCCCTGGCCTCTACAGCTGC 3195 Query 94378 TGTGGATCGCGTTTTGAAGAC-TTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436 || || | | || |||| ||||| || |||||| | |||| ||||| | || Sbjct 3196 TG-GGGTGAAGAGTTCGAGACGTTGTACGCCAAGTACGAAGCTGAGGGAAAGGCTCGCAA 3254 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 | || |||| | |||| ||| || | || ||| | ||||||||||| Sbjct 3255 GACCATCCGTGCTCAGCAGCTCTGGTTCGCTATTCTCGAGTCGCAGATCGAGACGGGTAC 3314 Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 ||| ||||| |||| ||||||| | | |||| |||||| ||||||||| ||||||| Sbjct 3315 GCCTTACATGTTGTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGTAC 3374 Query 94557 GATCAAGAGCTCG---AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||| ||||| || ||||| ||| | ||||||| || | |||| ||| | Sbjct 3375 GATC---CGCTCGAGCAACTTGTGCTGTGAGGTGATCGAGTACACAGATTCGGATGAGGT 3431 Query 94614 TGCTGTGTGTAACCT 94628 ||||| || ||||| Sbjct 3432 GGCTGTATGCAACCT 3446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718722755040