Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq140 113 3e-19 >seq140 Length=90041 Score = 113 bits (124), Expect = 3e-19 Identities = 315/481 (65%), Gaps = 7/481 (1%) Strand=Plus/Plus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 |||| ||||| |||| || |||| |||| | |||| ||| || || || | Sbjct 23013 TCAACGCCTTCAAACAGCGAGTCAATCTCAAGATACGCCTGAGCCGAGGACGAGAGCGTG 23072 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCA 517970 ||||| ||||| |||||||| || | | | || |||||| ||||| || | ||| Sbjct 23073 CGTTTGGCACGCTCACATGCCGTGCGCAAGCGACGCAAGGCTC--GCTGACTGCTCGTCA 23130 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | || || | |||||| || | || | | ||||||||||| |||| Sbjct 23131 TGTCCTTGCGGTACTTGCGCTTGAACTCGTTCACGAAATACTCCACAAGACGATTGTCAA 23190 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 | ||||| || || | | || | ||||| ||| || | |||| ||||| || |||| Sbjct 23191 AGTCTTCTCCACCAAGATGCGTGTCTCCTGCCGTTGCCTTGACTTCGAAAATGCCCTCTT 23250 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 | | | || ||| | || || || |||||||| | |||||| || || |||| Sbjct 23251 CGATCGTCAGCAGACTCACGTCGAACGTCCCACCACCAAGATCAAAGATGAGCACAT--- 23307 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 | | | || || ||| |||||||| || | || || || || || ||||| | Sbjct 23308 GGTGCTCGCCTCCCTTGCGATCCAGACCATAGGCGATGGCTGCCGCGGTGGGCTCATTGA 23367 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 | || | ||| ||||| | |||||||| || ||||| || || || || | || | Sbjct 23368 TTATACGCAACACATTCAAGCCAGCAATGGCCCCAGCATCCTTGGTCGCCTGCCGCTGCG 23427 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330 | ||||| ||||| || || || ||||| || || | | || | || ||||| |||| Sbjct 23428 AGTCGTTGAAATACGCCGGCACGGTAATCACCGCGTTCTTGACCTGCTTGCCAATGTAAG 23487 Query 518331 C 518331 | Sbjct 23488 C 23488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780786472735144