Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq715 194 3e-44 >seq715 Length=275277 Score = 194 bits (214), Expect = 3e-44 Identities = 399/579 (69%), Gaps = 16/579 (3%) Strand=Plus/Plus Query 25471 AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATT 25530 || || || ||||| |||||||||||||| || | |||||| | ||| ||||| Sbjct 110696 AAGGAGATCTGGGATATGTACAAGAAGGCGGAAGCCAGCTTCTGGACGGTCGAGGAGATC 110755 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| | | ||| | | | |||| | | || | | |||| || || || Sbjct 110756 GATCTTGTGCACGACCTCAAGGACTGGGGCAACATGACCGACAATGAGCGTCACTTCATC 110815 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA- 25649 ||| ||||| | || ||||| || ||| ||||||||| ||||||||||| || ||| | Sbjct 110816 AAGCACGTGCTCGCGTTCTTCGCTGCCAGTGATGGTATTGTGAACGAGAACCT-TGCCAT 110874 Query 25650 GAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || |||| || ||||| ||| | | || || || || |||||||| |||||||| | Sbjct 110875 GAACTTCAGCAACGAAGTCCAGGTGCCTGAAGCCCGC-TGCTTCTACGGCTTCCAGATTG 110933 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 |||| || || | ||||| || |||| | ||| |||| |||||||| | | Sbjct 110934 CCATTGAGAACATCCACTCGGAAATGTACTC---GCTGTTGATTGACACGTACATCAAGG 110990 Query 25766 ACGTCGCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCA-GCATCAAGAG 25823 | | |||||||| ||| | || ||| | ||||| ||| ||| |||| || | ||| Sbjct 110991 ATGCCGCCGAGA-AGAACCACTTGTTCCGCGCCATTGAG-ACAATCCCATGCGTGCAGAA 111048 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||| | ||| || ||| ||| |||||| ||||| | Sbjct 111049 GAAGGCCAACTGGGCGCTCCGCTGGTGTGACTCAGAGAACGCCGCGTTTGCTGAGCGTGT 111108 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCT 25942 || ||||| ||||| | ||||| ||||| ||| |||||||| ||| | |||||| Sbjct 111109 CGTCGCCTTCGCTGCCATTGAGGGTATCTTCTTCTCGGGTTCGTTCTGCT-CGGTCTTCT 111167 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||||||| || || |||||| || || ||| || |||||||| ||||| | | Sbjct 111168 GGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTTATCAGTCGTG 111227 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||| ||||||||| | || || |||||| ||||||||| Sbjct 111228 ACGAAGGTCTCCACTGTGACTTCGCCTGCTTGCTCTACA 111266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836393954560