Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq168 145 1e-29 >seq168 Length=77235 Score = 145 bits (160), Expect = 1e-29 Identities = 260/380 (68%), Gaps = 0/380 (0%) Strand=Plus/Minus Query 47787 TCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 ||| || || | |||||||| || || |||||| || | ||| |||||| ||| Sbjct 38655 TCCGGTAGCGACGACAAAATCTTCGGGCATTTCTTGCTGCATCATGCGCCACATGCACTC 38596 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 |||||| ||| |||| || ||||| ||||| |||||| || ||||| | || | ||| Sbjct 38595 GACATAGTCTTTGGCGTGCCCCCAATCACGCTTTGCATCTAGGTTTCCAATGTAAAGACA 38536 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966 |||| |||| | |||| || || | ||| ||||| || || || || || Sbjct 38535 CTCTTCAATACCGGCCTGGATTCGGACTACAGCGCGTGTGATCTTGCGGGTGACGAATGT 38476 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 | || || | || |||||||| || || || ||| | || ||||||||||| Sbjct 38475 TGGCCCTCGCCGAGGGCTCTCATGATTGAACAGTATTCCATTCACTGCGTACATTCCGTA 38416 Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086 | |||||||||||| || |||| || || | | |||| || || ||||| || Sbjct 38415 GGCTTCACGATAGTTGACGACACTCCAAAACGCAAATTGCTTTGAGACCCCGTAAGGCGA 38356 Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 ||||||||||| || ||| || |||| || ||| ||||||| || || || || || Sbjct 38355 GCGTGGATAGAACGGCGTGAGTTCACTCTGAGGCGTCACTTGCACTTTGCCGTACAGCTC 38296 Query 48147 ACTGGTGGATGCTTGATAGA 48166 || || || ||||| |||| Sbjct 38295 GCTCGTAGAAGCTTGGTAGA 38276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665488377275680