Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq52 132 4e-26 >seq52 Length=165522 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | ||| || |||||||| || | ||| || || || || ||||| || |||| Sbjct 29024 TCCACCACGCAAGCGGAGCACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAGTCCGA 28965 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||||| || ||||| || ||||||||| | ||||||| |||||||| || || Sbjct 28964 GAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGATCTGGAGG 28905 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | || || || || | || | | ||| ||| | || || Sbjct 28904 AATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCAATCGAGTCCGAAGGCTCGAC 28845 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || || || || || || || || || |||||||| || Sbjct 28844 GTCAAGCGTGATCGTCTTACCCGTCAACGTCTTCACGAAGATCTGCATCTT 28794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215800922084