Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq43 183 4e-41 >seq43 Length=178053 Score = 183 bits (202), Expect = 4e-41 Identities = 316/454 (70%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937 ||| | ||||| || || || | | ||| ||| || || || ||||| | ||| || Sbjct 81311 AGCGTCGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGATTC 81252 Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACG 146997 | ||||| ||| || || || | | || || ||||| || | ||| || || | || Sbjct 81251 AAGTAGATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACC 81192 Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || || | || ||| | || || ||| ||||| || || || || || || |||||| Sbjct 81191 TGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCC 81132 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| |||| | |||||||| |||||||||||||| || | || ||||| |||||| Sbjct 81131 ATGTCAGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGG 81072 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 || | ||||||||||| || |||||||| | ||||| || || ||||| || || Sbjct 81071 CAGAACATGTGGCACGGAGGGAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGAC 81012 Query 147178 ACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC-CACCTCAGCTG 147236 | | | |||| | | ||||| |||||| || | ||| ||| || | ||||| Sbjct 81011 AAGAGAATACGCCGGTCGTTCGGGTTGGTCTTAAGCTTGTGGATGACCTCAGC-GAGCTG 80953 Query 147237 GTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCC 147295 ||||| ||||| || ||| | | | ||| || ||| |||| |||||||| | Sbjct 80952 ATCCACACCCTGACCGGTGTA-ATCGGCGTGCATATCGGTATACTTGGCACCAAAGTGAC 80894 Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||||||||||| |||||||| || || ||||| Sbjct 80893 GCCACTGGAAGCCATACACTGGACCGAGATCGCC 80860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482719433600