Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq715 105 9e-18 >seq715 Length=275277 Score = 105 bits (116), Expect = 9e-18 Identities = 368/566 (65%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||||||||||||||| || || || || || | ||| || | ||||| || || || Sbjct 111258 AAGCAGGCGAAGTCACAGTGGAGACCTTCGTCACGACTGATAAGCTCGTTCGAGAAGCTG 111199 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAA 39732 || |||||||| ||||||||||| |||||||| || | | |||| || || || || || Sbjct 111198 AGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGACCG-AGCAGAACGAACCCGAGAA 111140 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG 39792 |||||| || || | || || || || || | | | ||| | || | | || | Sbjct 111139 GAAGATACCCTCAATGGCAGCGAAGGCGAC--GACACGCTCAGCAA-ACGCGGCGTTCTC 111083 Query 39793 T-ATCCACTTC-----TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTAT 39846 | | ||| | | ||||| | || ||||||| || || || ||||| || || Sbjct 111082 TGAGTCACACCAGCGGAGCGCCCAGTTGGCCTTCTTCTGCACGCATGGGATTGTCTCAAT 111023 Query 39847 AGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACT 39906 || || | | | || || | ||| || | || || || || ||||| Sbjct 111022 GGCGCGGAACAAGTGGTTCTTCTCGGCGGCATCCTTGATGTACGTGTCAATCAACAGCGA 110963 Query 39907 ATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTC 39966 |||||||| || |||||||| ||||| || ||||| || ||||| || || | ||||| Sbjct 110962 GTACATTTCCGAGTGGATGTTCTCAATGGCAATCTGGAAGCCGTAGAAGCAGCGGGCTTC 110903 Query 39967 AGTAATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 || | || || || || || || | || | || || ||||| || |||||| Sbjct 110902 AGGCACCTGGACTTCGTTGCTGAAGTTCAT--GGCAAGGTTCTCGTTCACAATACCATCA 110845 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA 40084 || || || || || || | || || || || || | |||| | |||| || Sbjct 110844 CTGGCAGCGAAGAACGCGAGCACGTGCTTGATGAAGTGACGCTCATTGTCGGTCATGTTG 110785 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||| |||| || | | ||| | || || | ||||| || || || Sbjct 110784 CCCCAGTCCTTGAGGTCGTGCACAAGATCGATCTCCTCGACCGTCCAGAAGCTGGCTTCC 110725 Query 40145 GCCTTTTTGTACATGTTCCATATATC 40170 ||||| |||||||| | ||| || || Sbjct 110724 GCCTTCTTGTACATATCCCAGATCTC 110699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902583475360