Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq598 98.7 3e-15 seq176 98.7 3e-15 >seq598 Length=3624 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 |||||| | |||||||||||| || |||||||||||| || || || || ||||| ||| Sbjct 2929 CCAATGTTGCGTGTGTTCAACGACACGGCTCGCTACGTTGACCAGGGCGGAGGCAAGCGC 2988 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || ||||| |||||||| ||||||| |||||||| ||||| Sbjct 2989 AAGGGTTCGTTCGCCATCTACTTGGAGCCATGGCACGCGGACAT 3032 >seq176 Length=73234 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 |||||| | |||||||||||| || |||||||||||| || || || || ||||| ||| Sbjct 72539 CCAATGTTGCGTGTGTTCAACGACACGGCTCGCTACGTTGACCAGGGCGGAGGCAAGCGC 72598 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || ||||| |||||||| ||||||| |||||||| ||||| Sbjct 72599 AAGGGTTCGTTCGCCATCTACTTGGAGCCATGGCACGCGGACAT 72642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588321266198180