Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq52 89.7 3e-13 >seq52 Length=165522 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| || | || |||||| || ||||| || || || || || || |||| || Sbjct 29006 CACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCCTC 28947 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || ||||| || || ||||| || || || || | ||||||||||| Sbjct 28946 GAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 28887 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||||| || || ||| | ||| | ||| ||| || || | || ||||| | Sbjct 28886 GATCTTCTG-CTTCACGTTGTCAATCGAGTCCGAAGGCTCGACGTCAAGCGTGATCGTCT 28828 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715 |||| || ||||| ||||| || |||||||| ||| |||| Sbjct 28827 TACCCGTCAACGTCTTCACGAAGATCTGCATCTTG-TTGT 28789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726822904692