Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq159 154 7e-33 >seq159 Length=79683 Score = 154 bits (170), Expect = 7e-33 Identities = 352/524 (67%), Gaps = 13/524 (2%) Strand=Plus/Plus Query 66596 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66655 || ||||| |||||||| | ||||| |||||||| |||||| || | ||| | | Sbjct 15105 GCCCAGAAAACCGGTGGCGTCTGCGCCTTTATCGACGCCGAGCACGCCATTGACGCCCAC 15164 Query 66656 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGC 66715 | |||||| |||||||| || | ||| || | | ||||| || | || Sbjct 15165 TGGGCCAAGCAACTCGGTGTCAACATTGACGACTTGTACATTTCCCAGCCAGACTCTGGT 15224 Query 66716 GAGCAGGCCCTGGAGATCGTTGACCTCCTCG--TCAAGTCTGGCGAGCTGTCCATCGTCG 66773 ||||||||||| |||||| || | | | || | || || | || |||| | Sbjct 15225 GAGCAGGCCCTCGAGATCACGGATA-CGTTGATTCGA-TCCGGTGCCGTGGATCTCGTGG 15282 Query 66774 TCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 66833 |||| ||| || ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct 15283 TCGTCGACAGTGTCGCGGCGCTGGTGCCACGGGCCGAGCTCGAAGGCGAGATGGGGGACC 15342 Query 66834 GTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCA 66893 || ||| |||| || || |||||| ||||| ||||||||||||| ||| | Sbjct 15343 CCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTGCGCAAGCTCACGGGCTCGC 15402 Query 66894 TCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66950 |||||| |||| || ||| | ||| |||| ||| | || ||||| |||| | Sbjct 15403 TCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCGTCAGAAGGTCGGGA 15459 Query 66951 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCT 67010 | | || ||| || ||| |||| |||| || | ||| | | | |||||| | Sbjct 15460 TCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACTCCGTTACTACGCGT 15516 Query 67011 CAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 67070 | || ||| | ||| | ||||| | || | ||||||||||| || || |||| Sbjct 15517 CGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGACATGGTCGTGGGCA 15576 Query 67071 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 67114 | | ||| ||||||| |||||||||||||||| ||||| Sbjct 15577 ATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGCCTCGCCG 15620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242858657057016