Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq43 120 2e-22 >seq43 Length=178053 Score = 120 bits (132), Expect = 2e-22 Identities = 210/302 (70%), Gaps = 8/302 (3%) Strand=Plus/Minus Query 29638 CTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGAC 29697 ||| ||| | ||||| || | ||| | | ||||| ||| ||||| || | | ||||| Sbjct 81279 CTGGATCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATGGAC 81220 Query 29698 AAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCT 29757 || || || | | ||||| | ||| ||||| |||| || | | | ||| || Sbjct 81219 GAAGTCACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTAACT 81160 Query 29758 GGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGA 29817 |||||| ||||| ||||| ||||| |||||||| | || | |||||| | |||||||| Sbjct 81159 GGCGATATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCACGA 81100 Query 29818 GAGCTCTCCGT-CGCTCACGTAAAACTGACA---CATGGCATGGCACGGAGGAAGGGCCA 29873 |||||| || | ||| ||||| ||||| || |||| ||||||||||| || |||| Sbjct 81099 GAGCTCGCCATTCGCG-ACGTAGAACTGGCAGAACATG---TGGCACGGAGGGAGCGCCA 81044 Query 29874 TGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGT 29933 | | |||| || ||||| ||| ||| || || |||| ||| | |||||| Sbjct 81043 TCTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGG 80984 Query 29934 TC 29935 || Sbjct 80983 TC 80982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406159616117464