Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq303 89.7 2e-13 >seq303 Length=25634 Score = 89.7 bits (98), Expect = 2e-13 Identities = 188/274 (69%), Gaps = 6/274 (2%) Strand=Plus/Plus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| |||| || ||||| | |||||||||| | | | | Sbjct 16034 CCATGCACATGTGCGTGGCCTCGATCACCACGGCCACGCCCTTGGGCTGGATTACGCCCA 16093 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACA 31124 | |||| ||| ||||| | || || || ||||| ||||||| || || | | ||| Sbjct 16094 TGATCGCGTTCGCAATCTGCTTGGTCAGGCGCTCCTGTACTTGCAATCGACGCGAAAACA 16153 Query 31125 TGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGA 31184 |||| | ||| | |||||||||| |||| | ||||| |||||||| | | Sbjct 16154 CCTCCGAGATGCGCGCGAGCTTGCTCAAACCCAGCACTTTGCCGTTTGGAATGTACCCAA 16213 Query 31185 TCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGGGAT 31242 | ||| ||| |||| || ||| | | |||||||||||| ||| ||||||| | || Sbjct 16214 T-GTGCACCTTGCCCGTGAAGGGCACCATGTGATGCTCGCACATG-GAGTAGAGGTCAAT 16271 Query 31243 GTCGCGCACCGTCACCATCTGGTCATG--CTTCT 31274 ||||||||| | ||||| | ||| || ||||| Sbjct 16272 GTCGCGCACGATGACCATTTCGTCGTGGTCTTCT 16305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187287989777664