Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq268 192 7e-44 >seq268 Length=430982 Score = 192 bits (212), Expect = 7e-44 Identities = 407/601 (68%), Gaps = 6/601 (1%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||||| ||| || ||||| | ||| || | ||||| ||| || || || | ||| || Sbjct 389226 CAACTGGATCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATG 389167 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 || |||||| |||| || ||| || | || || |||| || ||||| || | ||| Sbjct 389166 GACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTA 389107 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||||| || || || ||||| || || |||||||| |||| |||||||||| ||||| Sbjct 389106 ACTGGCGATATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCA 389047 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||| || ||| |||||||||||||| | | |||||| || || || ||||| Sbjct 389046 CGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGCGCCAT 388987 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT 145970 | ||||| || || ||||| || | | || | | || | | ||||| | Sbjct 388986 CTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGGT 388927 Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 ||| | || || | || |||||| ||||| ||||| || |||||| | | | Sbjct 388926 CTTAAGCTTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATC-GGCGT 388868 Query 146031 GGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 | | || ||| ||| || ||||| | | ||||||| || || || || || || | Sbjct 388867 GCATATCGGTATACTTGGCACCAAAGTGACGCAACTGGAAGCCATACACTGGACCGAGAT 388808 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | || | || | || || || ||| | | ||| | ||| || || ||| ||| Sbjct 388807 CGCCTGCTTCGCGATGACCGAGACCGATGCTTCCTAGGTATTCCTTCGATCCATTGCCGT 388748 Query 146150 CCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 |||| || | | | || || |||||| || |||| | |||| || |||||||| Sbjct 388747 CCCAAATATGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAA 388690 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | ||||||||| || || | |||||| || | ||| || || |||| ||||| Sbjct 388689 CCACAACAGCTCTTCTGCAACGCCACGCCAGAACACGCGCTTCGTCGTGAGCACCGGGAA 388630 Query 146268 C 146268 | Sbjct 388629 C 388629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074292173600