Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq268 158 1e-33 >seq268 Length=430982 Score = 158 bits (174), Expect = 1e-33 Identities = 308/451 (68%), Gaps = 8/451 (2%) Strand=Plus/Minus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 ||| |||||||| || || | | || ||| | | || || || | ||| || ||| Sbjct 389250 CGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGATTCAAGTA 389191 Query 20948 AACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGC 21007 | ||| || ||||| | | || || ||||| || | | || || | ||| ||||| Sbjct 389190 GATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGC 389131 Query 21008 GATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTC 21067 ||||| |||| | ||||| |||||||| |||||||| || |||||||||||||| Sbjct 389130 GATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCCATGTC 389071 Query 21068 GGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAA 21127 || || | |||||||| ||||| || ||||| || || ||||| ||||| || || Sbjct 389070 AGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAA 389011 Query 21128 AACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAAC 21187 | ||| || ||||| || |||||| | |||||| || || ||||| || ||| | Sbjct 389010 CATGTGGCACGGAGGAAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAG 388951 Query 21188 GATGCGCCGATCGTGGGGCCGCCTGTTAA----TTAGATCCACCACGTAACGCAGCTGGT 21243 || ||||| |||| || | |||| | ||| ||| | | || ||||| | Sbjct 388950 AATACGCCGGTCGTTCGGGTTGGTCTTAAGCTTGTGGAT-GACCTC--AGCG-AGCTGAT 388895 Query 21244 CCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCC 21303 |||| |||||||| ||| | ||||| | | |||| || ||||| || | | Sbjct 388894 CCACACCCTGACCGGTGTAATCGGCGTGCATATCGGTATACTTGGCACCAAAGTGACGCA 388835 Query 21304 ACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 ||||||| || ||||| || || |||||||| Sbjct 388834 ACTGGAAGCCATACACTGGACCGAGATCGCC 388804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774227403200