Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq268 95.1 8e-15 >seq268 Length=430982 Score = 95.1 bits (104), Expect = 8e-15 Identities = 356/548 (65%), Gaps = 13/548 (2%) Strand=Plus/Minus Query 25420 TCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACT 25479 |||| ||||| || | ||||| || ||||| ||| || || || | ||||| || | Sbjct 389218 TCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATGGACGAAGT 389159 Query 25480 CTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGA 25539 | || | | ||||| | || | ||| |||| || | | ||| ||||||| Sbjct 389158 CACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGA 389099 Query 25540 TGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGC 25599 | ||||| || || |||| |||||||| || || | |||||| | || ||||||||| Sbjct 389098 TATTAAACGGCACACCGAGGCCCATGTCAGCC-GATCGCTGGTACATTTGGCACGAGAGC 389040 Query 25600 TCTTCGT-CGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCC 25658 || | | ||| ||||| ||||| || | ||| |||||||||||| || || Sbjct 389039 TCGCCATTCGCG-ACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGCGCCATCTCCTT 388981 Query 25659 CAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGAT 25718 | |||| || ||||| || ||| || || | || ||| | |||||| | | Sbjct 388980 GAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTG---GTCTT 388924 Query 25719 AAGATCCGCGGTG--TTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT 25775 ||| | | || | || ||||||||||| ||| || | ||| || || ||| Sbjct 388923 AAGCTTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATCGGCGTGCAT 388864 Query 25776 GTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCC 25835 || || |||| || || || | | | ||||||| || ||||| || || || || || Sbjct 388863 ATCGGTATACTTGGCACCAAAGTGACGCAACTGGAAGCCATACACTGGACCGAGATCGCC 388804 Query 25836 ATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCA 25895 |||| | || | | || | | | | | || | || |||||| ||||||| Sbjct 388803 TGCTTCGCGATGACCGAGACCGATGCTTCCTAGGTATTCCTTCGATCCATTGCCGTCCCA 388744 Query 25896 GATCTTTACCCCCTTCTC--GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCAC 25953 || | | |||| || |||||| || |||| || ||| || |||| ||||||| Sbjct 388743 AATATGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAACCAC 388686 Query 25954 AGCAGCTC 25961 | |||||| Sbjct 388685 AACAGCTC 388678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136190554820