Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq296 111 1e-19 seq235 100 3e-16 >seq296 Length=213998 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || || | ||| | ||||| Sbjct 98319 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 98378 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || ||| | ||||| | | ||||| ||||| ||||| ||||| ||||| | Sbjct 98379 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTG 98438 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||| | | | |||| | | ||||| || | ||||||||| || Sbjct 98439 GATCTTCTGCTTGACGTTGTCAATGCTGTCCGATGGCTCGACATCGAGCGTGATGGTCTT 98498 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTAC 95013 || || ||||| ||||||||||||||||| |||| Sbjct 98499 GCCCGTCAGAGTCTTCACAAAGATCTGCATCTTTAC 98534 >seq235 Length=453453 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| |||| ||||||||||||||||| ||||| ||| Sbjct 11179 TCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTG 11238 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||| | | | | ||| | | |||||||| | ||| ||| Sbjct 11239 TCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCCGAAGGCTCGACGTCCAACGTAATG 11298 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||||||||| Sbjct 11299 GTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 11333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289294762400