Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 3e-11 >seq14 Length=753269 Score = 84.2 bits (92), Expect = 3e-11 Identities = 259/397 (65%), Gaps = 8/397 (2%) Strand=Plus/Plus Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 ||| || |||| ||| ||| || ||||| || | ||| || ||||| | | ||| Sbjct 131104 CCATTCACCGTTCGCCTCCACACGCTTCATGAACAAATCTGGGATCCACAACCCGTAAAA 131163 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || || | | | ||| ||| || || ||||| || | || | |||| | | Sbjct 131164 GAGGTCACGAGCACGATGGAGCTCATTACCGTGGTTCTTCTTCAAGTCCAAGAACTCGAA 131223 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCAT--AACTCCAGGCCGTTTGTTTCCT 63374 || || | ||||| || |||||||| ||||| | ||| | | || ||| ||| Sbjct 131224 GATGTCCGCGTGCCATGGCTCCAAGTAGATGGCGAACGAACCCTTG--CGCTTGCCTCCG 131281 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 ||||| || | ||| | ||| |||| || | || | ||||||||||| | ||| || Sbjct 131282 CCCTGGTCAACGTAGCGAGCCGTGTCGTTGAACACACGCAACATTGGAACGAGACCATTC 131341 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATA 63492 || || || |||||| || || || | ||||||| || | | | | |||| Sbjct 131342 GACGATCCGTTCGTACCGCGAATGTAACTGTTAGTGGCACGGATGTTGTGCATACTGAT- 131400 Query 63493 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATAC 63552 ||| || || || ||| || ||||| ||||||| || | |||||| ||||||| Sbjct 131401 -ACCGATGCCACCGGCCCACTTGGAGATAGATGCGCAGTTCTTGAGCGTGTCGTAGATAC 131459 Query 63553 CCTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63589 |||| ||| ||||| ||||| ||| | ||||| Sbjct 131460 CCTCAATGGAGTCATCCTTCATGGCAAGCAAGAAACA 131496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944552474400