Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq268 87.8 2e-12 >seq268 Length=430982 Score = 87.8 bits (96), Expect = 2e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 20134 CGGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTA 20193 ||| || ||||| |||||||| || ||| | | || ||||| | || | ||| Sbjct 389250 CGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGATTCAAGTA 389191 Query 20194 GATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGC 20253 |||||| ||||| || | || | || || |||| | || |||| || ||||| Sbjct 389190 GATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGC 389131 Query 20254 AAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTC 20313 | || || || | | || ||||| || ||||| || || || | |||||||| Sbjct 389130 GATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCCATGTC 389071 Query 20314 TCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAA 20373 |||| | ||| |||| || || || ||||| || | || || || || || || || Sbjct 389070 AGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAA 389011 Query 20374 CAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429 || ||| || || |||||||||||| | | ||| || || ||||| ||| ||| Sbjct 389010 CATGTGGCACGGAGGAAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGACA 388955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441370924165600