Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq296 131 4e-25 seq235 122 2e-22 >seq296 Length=213998 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| || | || || | || || ||||||||||| || Sbjct 98332 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 98391 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || |||||||| ||||| ||||| ||||| || || || |||||| Sbjct 98392 GCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTCTGCTTG 98451 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| |||||| ||||||| || || || || || | ||||| || |||| ||| Sbjct 98452 ACGTTGTCAATGCTGTCCGATGGCTCGACATCGAGCGTGATGGTCTTGCCCGTCAGAGTC 98511 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 98512 TTCACAAAGATCTGCAT 98528 >seq235 Length=453453 Score = 122 bits (134), Expect = 2e-22 Identities = 130/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || |||||||||||||| || ||||| | ||| || || ||||||||||||||||| Sbjct 11176 CCGTCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATGCCTTCC 11235 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||||||||||| ||||| | ||||||| || || || | ||| Sbjct 11236 TTGTCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCCGAAGGCTCGACGTCCAACGTA 11295 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGG 195154 | ||||| || || | || || ||||| | ||||| | |||| | ||| Sbjct 11296 ATGGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCATCTTGGGTTTCCTGG 11347 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 || || || ||||||||||| || || ||||| || || || ||||| ||||| ||||| Sbjct 29427 CGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCAATC 29368 Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135 | ||||||| || || ||||| || | |||||| || ||||| || || ||||| | Sbjct 29367 GAGTCCGAAGGCTCGACGTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTCACGAAGATC 29308 Query 195136 TGCAT 195140 ||||| Sbjct 29307 TGCAT 29303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476766820780