Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq296 120 2e-22 seq235 82.4 5e-11 >seq296 Length=213998 Score = 120 bits (132), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| |||||||| || | || | || || Sbjct 98320 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 98379 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||||||| | || | || |||||||| Sbjct 98380 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGG 98439 Query 34893 ATCTTCTGTTTGACGG-----ATGCTATC-GATTCACCGGCCTCAACATCGACGGTTATG 34946 |||||||| |||||| ||||| || ||| | ||| ||||||| || ||| Sbjct 98440 ATCTTCTGCTTGACGTTGTCAATGCTGTCCGAT------GGCTCGACATCGAGCGTGATG 98493 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || ||||| ||||||||||||||||||||||| || Sbjct 98494 GTCTTGCCCGTCAGAGTCTTCACAAAGATCTGCATCTT 98531 >seq235 Length=453453 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || ||||| || || ||||| || | ||| ||||| ||| | || | || |||||| Sbjct 11179 TCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTG 11238 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||||| |||||| | ||||| || | ||| || || | || ||| Sbjct 11239 TCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCCGAAGGCTCGACGTCCAACGTAATG 11298 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || || ||||| ||||| || ||||||||||| || Sbjct 11299 GTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCATCTT 11336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632254799520