Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq268 165 7e-36 >seq268 Length=430982 Score = 165 bits (182), Expect = 7e-36 Identities = 390/583 (67%), Gaps = 6/583 (1%) Strand=Plus/Minus Query 29798 TCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACT 29857 |||| ||||| || | ||||| || ||||| ||| || || || | | ||||| || | Sbjct 389218 TCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATGGACGAAGT 389159 Query 29858 CTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGA 29917 | || | | ||||| | ||| ||||| |||| || | | | ||| ||||||| Sbjct 389158 CACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGA 389099 Query 29918 TGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 29977 | ||||| || || ||||| |||||||| |||| | |||||| | || |||||||||| Sbjct 389098 TATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCACGAGAGCT 389039 Query 29978 CTCCGT-CGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCC 30036 | || | ||| ||||| ||||| || | |||||||||||||||| ||||| Sbjct 389038 CGCCATTCGCG-ACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGCGCCATCTCCTTG 388980 Query 30037 AAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG 30096 | |||| || ||||| || ||| || || |||| ||| | |||||| || | | Sbjct 388979 AGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGGTCTTAAGC 388920 Query 30097 AGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCC 30156 || | | | | ||||||||||| ||| || | ||| || || ||| || Sbjct 388919 TTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATCGGCGTGCATATCG 388860 Query 30157 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30216 || |||| || || || || | | ||||||| || ||||| || || || || || || Sbjct 388859 GTATACTTGGCACCAAAGTGACGCAACTGGAAGCCATACACTGGACCGAGATCGCCTGCT 388800 Query 30217 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30276 || | || ||| || | | | | | || | || || ||| ||||||| || Sbjct 388799 TCGCGATGACCGAGACCGATGCTTCCTAGGTATTCCTTCGATCCATTGCCGTCCCAAATA 388740 Query 30277 TTTACCCCCTTCTC--GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 30334 | | |||| || |||||| || |||| || ||| || |||| |||||||| || Sbjct 388739 TGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAACCACAACA 388682 Query 30335 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30377 |||| || | ||| | ||| || || | ||| |||||||| Sbjct 388681 GCTCTTCTGCAACGCCACGCCAGAACACGCGCTTCGTCGTGAG 388639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615906790820