Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 188 1e-42 >seq1 Length=1427593 Score = 188 bits (208), Expect = 1e-42 Identities = 398/579 (69%), Gaps = 16/579 (3%) Strand=Plus/Minus Query 25471 AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATT 25530 || || || ||||| |||||||||||||| || | |||||| | ||| ||||| Sbjct 982637 AAGGAGATCTGGGATATGTACAAGAAGGCGGAAGCCAGCTTCTGGACGGTCGAGGAGATC 982578 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| | | ||| | | | |||| | | || | | |||| || || || Sbjct 982577 GATCTTGTGCACGACCTCAAGGACTGGGGCAACATGACCGACAATGAGCGTCACTTCATC 982518 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA- 25649 ||| ||||| | || ||||| || ||| ||||||||| ||||||||||| || ||| | Sbjct 982517 AAGCACGTGCTCGCGTTCTTCGCTGCCAGTGATGGTATTGTGAACGAGAACCT-TGCCAT 982459 Query 25650 GAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || |||| || ||||| ||| | | || || || || |||||||| |||||||| | Sbjct 982458 GAACTTCAGCAACGAAGTCCAGGTGCCTGAAGCCCGC-TGCTTCTACGGCTTCCAGATTG 982400 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 |||| || || | ||| | || |||| | ||| |||| |||||||| | | Sbjct 982399 CCATTGAGAACATCCACCCGGAAATGTACTC---GCTGTTGATTGACACGTACATCAAGG 982343 Query 25766 ACGTCGCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCA-GCATCAAGAG 25823 | | |||||||| ||| | || ||| | ||||| ||| ||| |||| || | ||| Sbjct 982342 ATGCCGCCGAGA-AGAACCACTTGTTCCGCGCCATTGAG-ACAATCCCATGCGTGCAGAA 982285 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||| | ||| || ||| ||| |||||| ||||| | Sbjct 982284 GAAGGCCAACTGGGCGCTCCGCTGGTGTGACTCAGAGAACGCCGCGTTTGCTGAGCGTGT 982225 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCT 25942 || ||||| ||||| | ||||| ||||| ||| |||||||| ||| | |||||| Sbjct 982224 CGTCGCCTTCGCTGCCATTGAGGGTATCTTCTTCTCGGGTTCGTTCTGCT-CGGTCTTCT 982166 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||||||| || || |||||| || || ||| || |||||||| ||||| | | Sbjct 982165 GGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTTATCAGTCGTG 982106 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||| ||||||||| | || || |||||| ||||||||| Sbjct 982105 ACGAAGGTCTCCACTGTGACTTCGCCTGCTTGCTCTACA 982067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840852409600