Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq314 141 1e-28 >seq314 Length=100689 Score = 141 bits (156), Expect = 1e-28 Identities = 258/378 (68%), Gaps = 0/378 (0%) Strand=Plus/Minus Query 47787 TCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 ||| || || | |||||||| || || |||||| || | ||| |||||| ||| Sbjct 61715 TCCGGTAGCGACGACAAAATCTTCGGGCATTTCTTGCTGCATCATGCGCCACATGCACTC 61656 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 |||||| ||| |||| || ||||| ||||| |||||| || ||||| | || | ||| Sbjct 61655 GACATAGTCTTTGGCGTGCCCCCAATCACGCTTTGCATCTAGGTTTCCAATGTAAAGACA 61596 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966 |||| |||| | |||| || || | ||| ||||| || || || || || Sbjct 61595 CTCTTCAATACCGGCCTGGATTCGGACTACAGCGCGTGTGATCTTGCGGGTGACGAATGT 61536 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 | || || | || |||||||| || || || ||| | || ||||||||||| Sbjct 61535 TGGCCCTCGCCGAGGGCTCTCATGATTGAACAGTATTCCATTCACTGCGTACATTCCGTA 61476 Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086 | |||||||||||| || |||| || || | | |||| || || ||||| || Sbjct 61475 GGCTTCACGATAGTTGACGACACTCCAAAACGCAAATTGCTTTGAGACCCCGTAAGGCGA 61416 Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 ||||||||||| || ||| || |||| || ||| ||||||| || || || || || Sbjct 61415 GCGTGGATAGAACGGCGTGAGTTCACTCTGAGGCGTCACTTGCACTTTGCCGTACAGCTC 61356 Query 48147 ACTGGTGGATGCTTGATA 48164 || || || ||||| || Sbjct 61355 GCTCGTAGAAGCTTGGTA 61338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491571648800