Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_021309.1 Length=74711 Score E Sequences producing significant alignments: (Bits) Value seq136 168 3e-37 >seq136 Length=619635 Score = 168 bits (186), Expect = 3e-37 Identities = 355/524 (68%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 64885 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAG 64944 || ||||| |||||||| | ||||| |||||||| |||||| || | ||| || | Sbjct 121860 GCCCAGAAAACCGGTGGCGTCTGCGCCTTTATCGACGCCGAGCACGCCATTGACGCCCAC 121801 Query 64945 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65004 | |||||| |||||||| || | ||| || | | ||||| ||| |||| Sbjct 121800 TGGGCCAAGCAACTCGGTGTCAACATTGACGACTTGTACATTTCCCAGCCAGACTCTGGT 121741 Query 65005 GAGCAGGCCCTGGAGATCGTTGACCTCCTCG--TCAAGTCTGGCGAGCTGTCCATCGTCG 65062 ||||||||||| |||||| || | | | || | || || | || |||| | Sbjct 121740 GAGCAGGCCCTCGAGATCACGGATA-CGTTGATTCGA-TCCGGTGCCGTGGATCTCGTGG 121683 Query 65063 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 65122 |||| ||| ||| ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct 121682 TCGTCGACAGTGTCGCGGCGCTGGTGCCACGGGCCGAGCTCGAAGGCGAGATGGGGGACC 121623 Query 65123 GTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCA 65182 || ||| |||| || || |||||| ||||| ||||||||||||| ||| | Sbjct 121622 CCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTGCGCAAGCTCACGGGCTCGC 121563 Query 65183 TCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 65239 |||||| |||| || ||| | ||| |||| ||| | || ||||| |||| | Sbjct 121562 TCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCGTCAGAAGGTCGGGA 121506 Query 65240 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCT 65299 | | || ||| || ||| |||| |||| || | ||| | | | |||||| | Sbjct 121505 TCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACTCCGTTACTACGCGT 121449 Query 65300 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 65359 | || || | ||| | ||||| | || | ||||||||||| ||| || |||| Sbjct 121448 CGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGACAAGGTCGTGGGCA 121389 Query 65360 ACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCG 65403 | | ||| || |||| |||||||||||||||| ||||| Sbjct 121388 ATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGCCTCGCCG 121345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238949409849280